DRSC/TRiP Functional Genomics Resources

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Protein Alignment LSm7 and LSM6A

DIOPT Version :10

Sequence 1:NP_609807.1 Gene:LSm7 / 35003 FlyBaseID:FBgn0261068 Length:110 Species:Drosophila melanogaster
Sequence 2:NP_191540.1 Gene:LSM6A / 825150 AraportID:AT3G59810 Length:91 Species:Arabidopsis thaliana


Alignment Length:63 Identity:15/63 - (23%)
Similarity:28/63 - (44%) Gaps:9/63 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DKKVGGNNDGKEKRRKESILDLSKYLE-KQIRVKFAGGREASGILKGYDALLNLVLDNTVEYL 64
            ::||.|..        ::..|..|.:. :.:.||...|.:..|.|...|..:|:.::.|.||:
plant     5 EEKVSGTT--------KTPADFLKSIRGRPVVVKLNSGVDYRGTLTCLDGYMNIAMEQTEEYV 59

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LSm7NP_609807.1 LSm7 18..107 CDD:212476 12/48 (25%)
LSM6ANP_191540.1 LSm6 14..81 CDD:212473 12/46 (26%)

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