DRSC/TRiP Functional Genomics Resources

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Protein Alignment LSm7 and EMB2816

DIOPT Version :10

Sequence 1:NP_609807.1 Gene:LSm7 / 35003 FlyBaseID:FBgn0261068 Length:110 Species:Drosophila melanogaster
Sequence 2:NP_178480.1 Gene:EMB2816 / 814913 AraportID:AT2G03870 Length:99 Species:Arabidopsis thaliana


Alignment Length:93 Identity:57/93 - (61%)
Similarity:76/93 - (81%) Gaps:1/93 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 RKESILDLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYKLTEEQTRSL 81
            |||::|||:|:::|.::||..|||:.:|.|||||.|||||||..||::||.|:|.| |.:|||.|
plant     4 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFVRDHDDPLK-TTDQTRRL 67

  Fly    82 GLVVCRGTALVLICPQDGVESIANPFIT 109
            ||:||||||::|:.|.||.|.|||||:|
plant    68 GLIVCRGTAVMLVSPTDGTEEIANPFVT 95

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LSm7NP_609807.1 LSm7 18..107 CDD:212476 53/88 (60%)
EMB2816NP_178480.1 LSm7 5..93 CDD:212476 53/88 (60%)

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