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Protein Alignment LSm7 and Snrpgl1
DIOPT Version :10
| Sequence 1: | NP_609807.1 |
Gene: | LSm7 / 35003 |
FlyBaseID: | FBgn0261068 |
Length: | 110 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001396106.1 |
Gene: | Snrpgl1 / 687679 |
RGDID: | 1583028 |
Length: | 76 |
Species: | Rattus norvegicus |
| Alignment Length: | 72 |
Identity: | 25/72 - (34%) |
| Similarity: | 44/72 - (61%) |
Gaps: | 9/72 - (12%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 23 DLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYKLTEEQTRSLGLVVCR 87
:|.|:::|::.:|..|||...|||:|:|..:|||:|..|| ..|..|..::|:||.|
Rat 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE---------MATSGQQNNIGMVVIR 63
Fly 88 GTALVLI 94
|.:::::
Rat 64 GNSIIML 70
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| LSm7 | NP_609807.1 |
LSm7 |
18..107 |
CDD:212476 |
25/72 (35%) |
| Snrpgl1 | NP_001396106.1 |
Sm_G |
5..74 |
CDD:212466 |
25/72 (35%) |
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