DRSC/TRiP Functional Genomics Resources

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Protein Alignment LSm7 and SNRPE

DIOPT Version :10

Sequence 1:NP_609807.1 Gene:LSm7 / 35003 FlyBaseID:FBgn0261068 Length:110 Species:Drosophila melanogaster
Sequence 2:NP_003085.1 Gene:SNRPE / 6635 HGNCID:11161 Length:92 Species:Homo sapiens


Alignment Length:102 Identity:23/102 - (22%)
Similarity:48/102 - (47%) Gaps:18/102 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GNNDGKEKRRKESILDLSKYLEKQIRVKF----AGGREASGILKGYDALLNLVLDNTVEYLRDSD 68
            |.....:|...:.|..:.:||:.:.|::.    .......|.:.|:|..:|||||       |::
Human     5 GQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLD-------DAE 62

  Fly    69 EPYKLTEEQTRSLGLVVCRGTALVLICPQDGVESIAN 105
            |.:..|:.: :.||.::.:|..:.|:      :|::|
Human    63 EIHSKTKSR-KQLGRIMLKGDNITLL------QSVSN 92

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LSm7NP_609807.1 LSm7 18..107 CDD:212476 21/92 (23%)
SNRPENP_003085.1 Sm_E 11..89 CDD:212465 20/91 (22%)

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