DRSC/TRiP Functional Genomics Resources

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Protein Alignment LSm7 and lsm8

DIOPT Version :10

Sequence 1:NP_609807.1 Gene:LSm7 / 35003 FlyBaseID:FBgn0261068 Length:110 Species:Drosophila melanogaster
Sequence 2:NP_001289395.1 Gene:lsm8 / 566017 ZFINID:ZDB-GENE-070629-3 Length:96 Species:Danio rerio


Alignment Length:71 Identity:23/71 - (32%)
Similarity:37/71 - (52%) Gaps:5/71 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYKLTEEQTRSLGLVVCRG 88
            |..|:.:.:.:..:.||...|.|||:|..:||:||.:.|.:..|.:..    ||. .|||.:.||
Zfish     5 LESYIHRTVAIVTSDGRMIVGTLKGFDQAINLILDESHERVFSSSQGV----EQV-VLGLYIVRG 64

  Fly    89 TALVLI 94
            ..:.:|
Zfish    65 DNVAVI 70

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LSm7NP_609807.1 LSm7 18..107 CDD:212476 23/71 (32%)
lsm8NP_001289395.1 LSm8 2..92 CDD:212474 23/71 (32%)

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