DRSC/TRiP Functional Genomics Resources

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Protein Alignment LSm7 and snr-6

DIOPT Version :10

Sequence 1:NP_609807.1 Gene:LSm7 / 35003 FlyBaseID:FBgn0261068 Length:110 Species:Drosophila melanogaster
Sequence 2:NP_499620.1 Gene:snr-6 / 176668 WormBaseID:WBGene00004919 Length:90 Species:Caenorhabditis elegans


Alignment Length:73 Identity:15/73 - (20%)
Similarity:32/73 - (43%) Gaps:12/73 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 KYLEKQIRVKFAGGREAS----GILKGYDALLNLVLDNTVEYLRDSDEPYKLTEEQTRSLGLVVC 86
            :||:.:.||:.....:.:    |.:.|:|..:|:|.|..        |...:..:....:|.::.
 Worm    19 RYLQNRTRVQIWLYEDVTHRLEGYIIGFDEFMNVVFDEA--------EEVNMKTKGRNKIGRILL 75

  Fly    87 RGTALVLI 94
            :|..:.||
 Worm    76 KGDNITLI 83

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LSm7NP_609807.1 LSm7 18..107 CDD:212476 15/73 (21%)
snr-6NP_499620.1 Sm_E 8..85 CDD:212465 15/73 (21%)

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