Protein Alignment LSm7 and snr-5

DIOPT Version :10

• Sequence 1: NP_609807.1
• Gene: LSm7 / 35003
• FlyBaseID: FBgn0261068
• Length: 110
• Species: Drosophila melanogaster
• Sequence 2: NP_498708.1
• Gene: snr-5 / 176103
• WormBaseID: WBGene00004918
• Length: 85
• Species: Caenorhabditis elegans
• Alignment Length: 212
• Identity: 43/212 - (20%)
• Similarity: 73/212 - (34%)
• Gaps: 70/212 - (33%)

  Fly    10 LLKTRSTD---------DPAAGPPVSTPRRTPT--ILASTTPQIAGTSKGSESR---------HA 54
            |:||..:|         .||...|.|.....|:  :..|..|   ..:|.::||         |:
 Worm   519 LIKTFDSDPSRRGAFCVQPACMEPTSACIIQPSCFLPRSIFP---NKNKKNKSRKTQADFFKSHS 580

  Fly    55 ASAKSLPATAAPDPYSYTPMEGSLV--LLKNH---NAINYRTLD-FLHETNQDYVVIGTIGMPGV 113
            .|...|.|.......|:......|.  ::|..   :|:::.|.. |:||     ::.|.....|.
 Worm   581 GSLPELVAEPNTRSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFVHE-----LLYGKTPFKGS 640

  Fly   114 G-KSTVLNLLNTNLYAPDQSDNRKETIFPVHSTINVAGENEVRMHITED---RL----------- 163
            | ::|:.|::...|.            ||.....:.||.:.::..:.:|   ||
 Worm   641 GNRATLFNVVGEQLK------------FPESPATSYAGRDLIQALLVKDPKNRLGTKRGATEIKQ 693

  Fly   164 ---------ILLDCSEP 171
                     .|:.||.|
 Worm   694 HPFFEGVNWALIRCSTP 710

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
LSm7	NP_609807.1	LSm7	18..107	CDD:212476	22/105 (21%)
snr-5	NP_498708.1	Sm_F	8..76	CDD:212469