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Protein Alignment LSm7 and snr-7
DIOPT Version :10
| Sequence 1: | NP_609807.1 |
Gene: | LSm7 / 35003 |
FlyBaseID: | FBgn0261068 |
Length: | 110 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_491032.1 |
Gene: | snr-7 / 171834 |
WormBaseID: | WBGene00004920 |
Length: | 77 |
Species: | Caenorhabditis elegans |
| Alignment Length: | 78 |
Identity: | 27/78 - (34%) |
| Similarity: | 49/78 - (62%) |
Gaps: | 9/78 - (11%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 23 DLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYKLTEEQTRSLGLVVCR 87
:|.||::|::.:|..|.|..||||:|:|..:|:|:|..|||.:|.. :.:||:.|.|
Worm 8 ELKKYMDKEMDLKLNGNRRVSGILRGFDPFMNMVIDEAVEYQKDGG---------SVNLGMTVIR 63
Fly 88 GTALVLICPQDGV 100
|.::|::.|::.:
Worm 64 GNSVVIMEPKERI 76
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| LSm7 | NP_609807.1 |
LSm7 |
18..107 |
CDD:212476 |
27/78 (35%) |
| snr-7 | NP_491032.1 |
Sm_G |
5..74 |
CDD:212466 |
27/74 (36%) |
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