DRSC/TRiP Functional Genomics Resources

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Protein Alignment LSm7 and SmF

DIOPT Version :10

Sequence 1:NP_609807.1 Gene:LSm7 / 35003 FlyBaseID:FBgn0261068 Length:110 Species:Drosophila melanogaster
Sequence 2:XP_061507398.1 Gene:SmF / 1273301 VectorBaseID:AGAMI1_002233 Length:88 Species:Anopheles gambiae


Alignment Length:59 Identity:18/59 - (30%)
Similarity:26/59 - (44%) Gaps:1/59 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 KQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYKLTEEQTRSLGLVVCRG 88
            |.:.:|...|.|..|.|...|..:|:.|.||.|:: |......|.|...|...::..||
Mosquito    19 KPVIIKLKWGHEYKGFLVSVDGYMNMQLANTEEFV-DGQNTGHLGEVLIRCNNVLYIRG 76

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LSm7NP_609807.1 LSm7 18..107 CDD:212476 18/59 (31%)
SmFXP_061507398.1 None

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