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Protein Alignment LSm7 and lsm7
DIOPT Version :9
Sequence 1: | NP_001246045.1 |
Gene: | LSm7 / 35003 |
FlyBaseID: | FBgn0261068 |
Length: | 110 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_017951866.1 |
Gene: | lsm7 / 100127774 |
XenbaseID: | XB-GENE-1008123 |
Length: | 125 |
Species: | Xenopus tropicalis |
Alignment Length: | 98 |
Identity: | 73/98 - (74%) |
Similarity: | 88/98 - (89%) |
Gaps: | 1/98 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 KEKRRKESILDLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYKLTEEQ 77
|||::||||||||||::|.|||||.|||||||:|||:|.|||||||.|:||:||.|:.|||||:
Frog 26 KEKKKKESILDLSKYIDKAIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQYKLTED- 89
Fly 78 TRSLGLVVCRGTALVLICPQDGVESIANPFITQ 110
||.|||||||||::||||||||:|:|.|||:.|
Frog 90 TRQLGLVVCRGTSVVLICPQDGMEAIPNPFVQQ 122
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
LSm7 | NP_001246045.1 |
LSm7 |
18..107 |
CDD:212476 |
67/88 (76%) |
lsm7 | XP_017951866.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
118 |
1.000 |
Domainoid score |
I5788 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
1 |
1.000 |
- |
- |
|
H6781 |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1593201at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0004040 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto105005 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR10553 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X2785 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
7 | 7.110 |
|
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