DRSC/TRiP Functional Genomics Resources

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Protein Alignment glu and SMC6

DIOPT Version :10

Sequence 1:NP_723996.1 Gene:glu / 35001 FlyBaseID:FBgn0015391 Length:1409 Species:Drosophila melanogaster
Sequence 2:XP_011531409.1 Gene:SMC6 / 79677 HGNCID:20466 Length:1110 Species:Homo sapiens


Alignment Length:1383 Identity:279/1383 - (20%)
Similarity:523/1383 - (37%) Gaps:389/1383 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RQSGQFRVPQLTAQQQLRAQQQQEEEDAAVDALDDALIFDDEEGGTRIGDIYIPPPVPPHCSMES 82
            |:...|..|     :..:..:|:|.||...|.      .:||..||.:             :...
Human     4 RKEENFSSP-----KNAKRPRQEELEDFDKDG------DEDECKGTTL-------------TAAE 44

  Fly    83 TGPRLIISKIVNRNFKSYAGEVELGPFH--QSFTAIIGPNGSGKSNVIDSMMFVFGCRANRIRCK 145
            .|   ||..|..:||..::   .||||.  .:...::|.||||||.|:.:::...|.||  :...
Human    45 VG---IIESIHLKNFMCHS---MLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGRA--VATN 101

  Fly   146 RVSTLIHSSSSYPNLRSCSVAVHFKQIVDKGDGTCE-DVPDSSIVIERTAMSDNSSYYQINDKRA 209
            |.|:|........|....|:.:.     ::||...: .|..:||:|::....|.|..|::.....
Human   102 RGSSLKGFVKDGQNSADISITLR-----NRGDDAFKASVYGNSILIQQHISIDGSRSYKLKSATG 161

  Fly   210 QL-----KDVAKLLKKHHVDLEHNRFLILQGEVESIAMMKPKGQTENETGMLEY------LEDIV 263
            .:     :::..:|...::.:: |...:|..|     |.|...|::||....::      ||.:.
Human   162 SVVSTRKEELIAILDHFNIQVD-NPVSVLTQE-----MSKQFLQSKNEGDKYKFFMKATQLEQMK 220

  Fly   264 GTQRYI-----RPLQQINQRVDQLTDDR---TEKHNRC------------------KLAEREMKD 302
            ....||     |..:||:|..::||:.:   .||..|.                  ::|...:.:
Human   221 EDYSYIMETKERTKEQIHQGEERLTELKRQCVEKEERFQSIAGLSTMKTNLESLKHEMAWAVVNE 285

  Fly   303 LEQPFNEAVDYL------------KKENELVRTKSFHIQKIISIKKSKLEQYTQEHEACAEELKT 355
            :|:..|...|.:            |.|.:.||..... ||...| :.|||:.::|..|.|.|...
Human   286 IEKQLNAIRDNIKIGEDRAARLDRKMEEQQVRLNEAE-QKYKDI-QDKLEKISEETNARAPECMA 348

  Fly   356 HDEGTAALKQSRAEKETIIRKEIEEYEALVKKREQIKKRLVTVESAYTEIQSTMENTNKQRKKDK 420
            ......|.|::..|.|.:..:.:.||:||.|..||:.||:                  ::.||  
Human   349 LKADVVAKKRAYNEAEVLYNRSLNEYKALKKDDEQLCKRI------------------EELKK-- 393

  Fly   421 AQIEKNEKELEDLHKLPEK--NQREIEDCNKKLESLEVSKVTLNEELEKQQAELTKTTAPLTEKR 483
                ..::.||     ||:  .|::|....:::::.:..:.::|:|:|:.|..:.|.    .|:.
Human   394 ----STDQSLE-----PERLERQKKISWLKERVKAFQNQENSVNQEIEQFQQAIEKD----KEEH 445

  Fly   484 LKLSDELVGLKEKVNTAKGEVQVFESQLKILKQAETTESRKY--------ETLKSSYEQSQKSLE 540
            .|:..|.:.:|..::       ..:.|||.||.::|...:::        |.:..:|.|...:.:
Human   446 GKIKREELDVKHALS-------YNQRQLKELKDSKTDRLKRFGPNVPALLEAIDDAYRQGHFTYK 503

  Fly   541 EKVTRVDELKESIPRMKTEIASKSAEVDKMVK------------EERNLSMQCNKLRTEINERSS 593
            .    |..|...|.....|:|   ..::..:|            :||.|.....:.......|..
Human   504 P----VGPLGACIHLRDPELA---LAIESCLKGLLQAYCCHNHADERVLQALMKRFYLPGTSRPP 561

  Fly   594 VMQAQRSNNKVLDFLMRMKMEGKIPGILGRLGDLGGIDAKYDIAISTACGRLDNIVTDN------ 652
            ::.:: ..|::.|...|.......|.:|..|                   .:||.|..|      
Human   562 IIVSE-FRNEIYDVRHRAAYHPDFPTVLTAL-------------------EIDNAVVANSLIDMR 606

  Fly   653 -YETASAAIGALKEYNVGRATFITLDKIEHHRREANSRINTPENVPRLYDLVKVEDDRVRTAFYF 716
             .||    :..:|..:|.||.      ::..:...|.|           :....:.|:|....|:
Human   607 GIET----VLLIKNNSVARAV------MQSQKPPKNCR-----------EAFTADGDQVFAGRYY 650

  Fly   717 ALRNTLVCDDLEQGTRIAYGRERYRVVTLRGEMIEMTGTMSGGGSRPIRGKMGTQVRTKTAESAD 781
            :..||                                                   |.|......
Human   651 SSENT---------------------------------------------------RPKFLSRDV 664

  Fly   782 SSQISQKALEDMQIQAEELQARVNYCQEQQGSLEREIQTLKNGLQRDEAEYKRLAVSITSLEQQM 846
            .|:||     |::.:.|...|::...|:...:||::|:..:..|:|.:..||.|.:.|    ::.
Human   665 DSEIS-----DLENEVENKTAQILNLQQHLSALEKDIKHNEELLKRCQLHYKELKMKI----RKN 720

  Fly   847 ASNLKQCE-AQRQRMLKKTTDERAVKEREEQIEAAKQELEQAQFAEQAVSSQIEEIQNQYDTLRN 910
            .|.:::.| .:..:.:...|.|...:|.:.:::..::.:||.:...:.:.|...|.:|:||.:: 
Human   721 ISEIRELENIEEHQSVDIATLEDEAQENKSKMKMVEEHMEQQKENMEHLKSLKIEAENKYDAIK- 784

  Fly   911 ESVKPVEAKIKKVNSQIEKLAANVR-SLNVGLATADRNITKITGNNNNLRENIKAAEEKLKSLNE 974
                      .|:| |:.:||..:: .||:    ||..:       :|.:...:..|||.|...:
Human   785 ----------FKIN-QLSELADPLKDELNL----ADSEV-------DNQKRGKRHYEEKQKEHLD 827

  Fly   975 DRNKAKEKKEELEKEIEESEASIEGAKSQSSDIKKEIDEITKEENKRNI--ERIEIDTKLQAAAG 1037
            ..||.|.:.:..|||:||                       |....|.|  ||||::........
Human   828 TLNKKKRELDMKEKELEE-----------------------KMSQARQICPERIEVEKSASILDK 869

  Fly  1038 KMNKVKNDIPGWQAQLAPLKLNEIPGETEPQAPLKELNEEELEAETLEALQYKQTMLEEDLKTKK 1102
            ::|:::..|   ||:.|                 ...:.||:..:..||   ::|.|:.|.|.: 
Human   870 EINRLRQKI---QAEHA-----------------SHGDREEIMRQYQEA---RETYLDLDSKVR- 910

  Fly  1103 PNLSCIKEFNEKRLVYLDRVRVLEDITSKRNEMRDKYEEVRKRRYKEFMDGFSIITRKLKEMYQM 1167
                .:|:|          :::|.:|...|.:   .|::.|..|.|...:.:..|     .::||
Human   911 ----TLKKF----------IKLLGEIMEHRFK---TYQQFRSFRQKNKPNLYYYI-----NLFQM 953

  Fly  1168 --ITLGGDAELELVDSMDPFTEGVNF---------TVRP---PKKSWKYISNLSGGEKTLSSLAL 1218
              :||......:.:.|...:...:||         :|:|   .|.::..:..|||||::.|::..
Human   954 QCLTLRCKLYFDNLLSQRAYCGKMNFDHKNETLSISVQPGEGNKAAFNDMRALSGGERSFSTVCF 1018

  Fly  1219 VFALHYYKPSPLYFMDEIDAALDFKNVSIVGHYI---KERTKNAQFIIVSLRVNMFEL-ANFLVG 1279
            :.:|.....||...:||.|..:|..|..|....|   .:..:..|||:::.: :|..| ::.|:.
Human  1019 ILSLWSIAESPFRCLDEFDVYMDMVNRRIAMDLILKMADSQRFRQFILLTPQ-SMSSLPSSKLIR 1082

  Fly  1280 IYKVSDCTDSITMLNYPP 1297
            |.::||.....|.|.:.|
Human  1083 ILRMSDPERGQTTLPFRP 1100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gluNP_723996.1 SMC_N 89..1287 CDD:426784 262/1300 (20%)
SMC6XP_011531409.1 P-loop containing Nucleoside Triphosphate Hydrolases 48..>204 CDD:476819 41/171 (24%)
SMC_prok_B <215..>900 CDD:274008 171/903 (19%)
P-loop containing Nucleoside Triphosphate Hydrolases <996..1094 CDD:476819 26/98 (27%)

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