Sequence 1: | NP_723996.1 | Gene: | glu / 35001 | FlyBaseID: | FBgn0015391 | Length: | 1409 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_651211.2 | Gene: | SMC1 / 42853 | FlyBaseID: | FBgn0040283 | Length: | 1238 | Species: | Drosophila melanogaster |
Alignment Length: | 1271 | Identity: | 336/1271 - (26%) |
---|---|---|---|
Similarity: | 603/1271 - (47%) | Gaps: | 175/1271 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 96 NFKSYAGEVELGPFHQSFTAIIGPNGSGKSNVIDSMMFVFGCRANRIRCKRVSTLIHSSS-SYPN 159
Fly 160 LRSCSVAVHFKQIVDKGDGTCEDVPDSSIVIERTAMSDNSSYYQINDKRAQLKDVAKLLKKHHVD 224
Fly 225 LEHNRFLILQGEVESIAMMKPKGQTENETGMLEYLEDIVGT----QRYIRPLQQI---------- 275
Fly 276 NQRVDQLTDDRTE-KHNRCKLAEREMKDLEQPFNEAVDYLKKENELVRTKSFHIQKIISIKKSKL 339
Fly 340 EQYTQEHEACAEELKTHDEGTAALKQSRAEKETIIR------KEIEEYEALVKKREQI----KKR 394
Fly 395 LVTVESAYTEIQSTMENTNKQRKKDKAQIEKNEKELEDLHKLPEKNQREIE-DCNKKLESLEVSK 458
Fly 459 VTLNE-ELEKQQAELTKTTAPLTEKRLKLSDELVGLKEKVNTAKGE----VQVFESQLKILKQAE 518
Fly 519 TTESRKYETLKSSYEQSQKSLEEKVTRVDELKESIPRMKTEIASKSAEVDKMVKEERNLSMQCNK 583
Fly 584 LRTEINERSSVMQAQRSNNKVLDFLMRMKMEGKIPGILGRLGDL-GGIDAKYDIAISTACGR-LD 646
Fly 647 NIVTDNYETASAAIGALKEYNVGRATFITLDKIE-HHRREANSRINTPENVPRLYDLVKVEDDRV 710
Fly 711 RTAFYFALRNTLVCDDLEQGTRIAY--GRERYRVVTLRGEMIEMTGTMSGGGSRPIRGKMGTQVR 773
Fly 774 TKTAESADSSQISQKALEDMQIQAEELQARVNYCQEQQ--GSLEREIQTLKNGLQRDEAEYKRLA 836
Fly 837 VSITSLEQQMASNLKQCEAQRQRMLKKTTD-ERAVKEREEQIEAAKQELEQ------AQFAEQAV 894
Fly 895 SSQIEEIQNQYDTLRNESVK---PVEAKIKKVNSQIEKLAANVRSLNVGLATADRNITKITGNNN 956
Fly 957 NLRENIKAAEEK-LKSLNEDRNKAKEKKEELEKEIEESEASIEGAKSQSSDIKKEIDEITKEENK 1020
Fly 1021 RNIERIEIDTKLQAAAGKMNKVKNDIPGWQAQ----LAPL---KLNEIPGETEPQAP-------- 1070
Fly 1071 LKELNEEELEAETLEALQ---YKQT--MLEEDLKTKKPNLSCIKEFNEKRLVYLDRV-------- 1122
Fly 1123 RVLEDITSKRNEMRDKYEEVRKRRYKEFMDGFSIITRKLKEMYQMIT--------LGGDAELELV 1179
Fly 1180 DSMDPFTEGVNFTVRPPKKSWKYISNLSGGEKTLSSLALVFALHYYKPSPLYFMDEIDAALDFKN 1244
Fly 1245 VSIVGHYIKERTKNAQFIIVSLRVNMFELANFLVGI 1280 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
glu | NP_723996.1 | ABC_SMC4_euk | 87..>246 | CDD:213241 | 57/150 (38%) |
Smc | 89..1281 | CDD:224117 | 336/1271 (26%) | ||
SMC_hinge | 618..733 | CDD:214944 | 34/117 (29%) | ||
ATP-synt_B | <825..904 | CDD:304375 | 18/85 (21%) | ||
ABC_SMC4_euk | <1196..1290 | CDD:213241 | 40/85 (47%) | ||
SMC1 | NP_651211.2 | Smc | 26..1216 | CDD:224117 | 336/1271 (26%) |
ABC_SMC1_euk | 27..>171 | CDD:213242 | 57/149 (38%) | ||
SMC_hinge | 535..653 | CDD:214944 | 34/117 (29%) | ||
DUF4700 | <697..>810 | CDD:292399 | 28/117 (24%) | ||
ABC_SMC1_euk | <1130..1232 | CDD:213242 | 40/86 (47%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45464467 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 69 | 1.000 | Inparanoid score | I406 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D326079at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.800 |