Sequence 1: | NP_723996.1 | Gene: | glu / 35001 | FlyBaseID: | FBgn0015391 | Length: | 1409 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101484.1 | Gene: | Smc6 / 313961 | RGDID: | 1311214 | Length: | 1097 | Species: | Rattus norvegicus |
Alignment Length: | 1367 | Identity: | 267/1367 - (19%) |
---|---|---|---|
Similarity: | 517/1367 - (37%) | Gaps: | 393/1367 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 32 QQLRAQQQQEEEDAAVDALDDALIFDDEEGGTRIGDIYIPPPVPPHCSMESTGPRLIISKIVNRN 96
Fly 97 FKSYAGEVELGPFH--QSFTAIIGPNGSGKSNVIDSMMFVFGCRANRIRCKRVSTLIHSSSSYPN 159
Fly 160 LRSCSVAVHFKQIVDKGDGTCE-DVPDSSIVIERTAMSDNSSYYQINDKRAQL-----KDVAKLL 218
Fly 219 KKHHVDLEHNRFLILQGEVESIAMMKPKGQTENETGMLEY------LEDIVGTQRYI-----RPL 272
Fly 273 QQINQRVDQLTDDR---TEKHNRC------------------KLAEREMKDLEQPFNEAVDYL-- 314
Fly 315 ----------KKENELVRTKSFHIQKIISIKKSKLEQYTQEHEACAEE---LKTHDEGTAALKQS 366
Fly 367 RA--EKETIIRKEIEEYEALVKKREQIKKRLVTVESAYTEIQSTMENTNKQRKKDKAQIEKNEKE 429
Fly 430 LEDLHKLPEKNQREIEDC--NKKLESLEVSKVTLNEELEKQQAELTKTTAPLTEKRLKLSDELVG 492
Fly 493 LKEKVNTAKGEVQVFESQLKILKQAETTESRKY--------ETLKSSYEQSQKSLEEKVTRVDEL 549
Fly 550 KESIPRMKTEIASKSAEVDKMVK------------EERNLSMQCNKLRTEINERSSVMQAQRSNN 602
Fly 603 KVLDFLMRMKMEGKIPGILGRLGDLGGIDAKYDIAISTACGRLDNIVTDN-------YETASAAI 660
Fly 661 GALKEYNVGRATFITLDKIEHHRREANSRINTPENVPRLYDLVKVEDDRVRTAFYFALRNTLVCD 725
Fly 726 DLEQGTRIAYGRERYRVVTLRGEMIEMTGTMSGGGSRPIRGKMGTQVRTKTAESADSSQISQKAL 790
Fly 791 EDMQIQAEELQARVNYCQEQQGSLEREIQTLKNGLQRDEAEYKRLAVSITSLEQQMASNLKQCE- 854
Fly 855 AQRQRMLKKTTDERAVKEREEQIEAAKQELEQAQFAEQAVSSQIEEIQNQYDTLRNESVKPVEAK 919
Fly 920 IKKVNSQIEKLAANVRSLNVGLATADRNITKITGNNNNLRENIKAAEEKLKSLNEDRNKAKEKKE 984
Fly 985 ELEKEIEESEASIEGAKSQSSDIKKEIDEITKEENKRNIERIEIDTKLQAAAGKMNKVKNDIPGW 1049
Fly 1050 QAQLAPLKLNEIPGETEPQAPL--KELN--EEELEAETLEALQYKQTMLEEDLKTKKPNLSCIKE 1110
Fly 1111 FNEKRLVYLDRVRVLEDITSKRNEMR---DKYEEVRKRRYKEFMDGFSIITRKLKEMYQMITLGG 1172
Fly 1173 DAELELVDSMDPFTEGVNFTVRP---PKKSWKYISNLSGGEKTLSSLALVFALHYYKPSPLYFMD 1234
Fly 1235 EIDAALDFKNVSIVGHYI---KERTKNAQFIIVSLRVNMFEL-ANFLVGIYKVSDCTDSITMLNY 1295
Fly 1296 PP 1297 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
glu | NP_723996.1 | ABC_SMC4_euk | 87..>246 | CDD:213241 | 40/166 (24%) |
Smc | 89..1281 | CDD:224117 | 252/1292 (20%) | ||
SMC_hinge | 618..733 | CDD:214944 | 19/121 (16%) | ||
ATP-synt_B | <825..904 | CDD:304375 | 13/79 (16%) | ||
ABC_SMC4_euk | <1196..1290 | CDD:213241 | 27/97 (28%) | ||
Smc6 | NP_001101484.1 | Smc | 54..1075 | CDD:224117 | 253/1296 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.900 |