DRSC/TRiP Functional Genomics Resources

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Protein Alignment glu and C44C10.10

DIOPT Version :9

Sequence 1:NP_723996.1 Gene:glu / 35001 FlyBaseID:FBgn0015391 Length:1409 Species:Drosophila melanogaster
Sequence 2:NP_509954.1 Gene:C44C10.10 / 183458 WormBaseID:WBGene00008090 Length:127 Species:Caenorhabditis elegans


Alignment Length:79 Identity:21/79 - (26%)
Similarity:44/79 - (55%) Gaps:18/79 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 IYIPPPVPPHCSMESTGPRLI-----ISKIVNRNFKSY--AGEVELGPFHQSF---TAIIGPNGS 122
            ||:..|:    ||.::|..:|     ::::::.:.|::  ..:|:    ::||   |.|.||||.
 Worm    26 IYLFLPL----SMSASGGFIIKLIDSMTQLLSISVKNFMCLEDVK----YESFGKITTITGPNGC 82

  Fly   123 GKSNVIDSMMFVFG 136
            |||.::.::..:.|
 Worm    83 GKSALVRAIGILTG 96

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gluNP_723996.1 ABC_SMC4_euk 87..>246 CDD:213241 15/60 (25%)
Smc 89..1281 CDD:224117 14/53 (26%)
SMC_hinge 618..733 CDD:214944
ATP-synt_B <825..904 CDD:304375
ABC_SMC4_euk <1196..1290 CDD:213241
C44C10.10NP_509954.1 AAA_23 54..>117 CDD:379210 14/47 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1196
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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