Sequence 1: | NP_723996.1 | Gene: | glu / 35001 | FlyBaseID: | FBgn0015391 | Length: | 1409 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_496476.2 | Gene: | smc-6 / 174776 | WormBaseID: | WBGene00010056 | Length: | 1149 | Species: | Caenorhabditis elegans |
Alignment Length: | 1323 | Identity: | 261/1323 - (19%) |
---|---|---|---|
Similarity: | 485/1323 - (36%) | Gaps: | 379/1323 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 83 TGPRLIIS----KIVNRNFKSYAG-EVELGPFHQSFTAIIGPNGSGKSNVIDSMMFVFGCRANRI 142
Fly 143 RCKRVSTLIHSSSSYPNLRSCSVAVHFKQIVDKGDGTCEDV-------------P--DSSIVIER 192
Fly 193 TAMSDNSSYYQ---------------INDKRAQLKDVAKLLKKHHVDLEHNRFLILQGEVES-IA 241
Fly 242 MMKPKG-------QTENETGMLEYLE-----------------DIVGTQRYIRPLQQINQRVDQL 282
Fly 283 TDDRTEKHNRC-KLAEREMKDLEQPFNEAVDYLKKENELVRTKSFHIQKIISIKKSKLEQYTQEH 346
Fly 347 EACAEELKTHDEGTAALKQSRAEKETIIRKEIEEYEALVKKREQIKKRLVTVESAYTEIQSTMEN 411
Fly 412 TNKQRKKDKAQIEKNEKELEDLHKLPEKNQREIEDCNKKLESLEVSKVTLNEELEKQQAELTKTT 476
Fly 477 APLTEKRLKLSDELVGLKEKVNTAKGEVQVFESQLKILKQAETTESRKYETLKSSYEQSQKSLEE 541
Fly 542 KVTRVDELKESIPRMKTEIASKSAEVDKMVKEERNLSMQCNKLRTEINERSSVMQAQRSNNKVLD 606
Fly 607 FLMRMKMEGKIP-GILGRLGDLGGIDAKYDIAISTACGRL-DNIVTDNYETASAAIGALKEYNV- 668
Fly 669 --GRATFITLDKIEHHRREANSRINTPENVP-----RLYDLVKVEDDRVRTAFYFALRNTLV--- 723
Fly 724 -CDD---LEQGTRIAY-------GRERYRVVTLRGEMIEMTGT------MSGGGSRPIRGKMGTQ 771
Fly 772 VRTKTAESADSSQISQKALEDMQIQAEELQARVNYCQEQQGSLEREIQTLKNGLQRDEAEYKRLA 836
Fly 837 VSITSLEQQMASNLKQCEAQRQRMLKKTTDERAVKEREEQIEAAKQELEQAQFAEQAVSSQIEEI 901
Fly 902 QNQYDTLRNESVKPVEAKIKKVNSQIEKLAANVRSLNVGLATADRNITKITGNNNNLRENIKAAE 966
Fly 967 EKLKSLNEDRNKAKEKKEELEKEIEESEASIEGAKSQSSDIKKEIDEITKEENKRNIERIEIDTK 1031
Fly 1032 LQAAAGKMNKVKND------IPGWQAQLAPLKLNEIPGETEPQAPLKELNEEELEAETLEALQYK 1090
Fly 1091 QTMLEEDLKTKKPNLSCIKEFNE--KRLVYLDRVRVLEDI-----------------TSKRNEMR 1136
Fly 1137 --DKYEEVRKRRYKEFMDG---------FSIITRKLKEMYQMITLGGDAELELVDSMD--PFTEG 1188
Fly 1189 VNFTVRPPKKSWKY----------ISNLSGGEKTLSSLALVFALHYYKPSPLYFMDEIDAALDFK 1243
Fly 1244 NVSIVGHYIKE-RTK---NAQFI 1262 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
glu | NP_723996.1 | ABC_SMC4_euk | 87..>246 | CDD:213241 | 41/194 (21%) |
Smc | 89..1281 | CDD:224117 | 258/1317 (20%) | ||
SMC_hinge | 618..733 | CDD:214944 | 27/131 (21%) | ||
ATP-synt_B | <825..904 | CDD:304375 | 15/78 (19%) | ||
ABC_SMC4_euk | <1196..1290 | CDD:213241 | 25/81 (31%) | ||
smc-6 | NP_496476.2 | SMC_N | 75..1128 | CDD:330553 | 254/1285 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |