Sequence 1: | NP_723996.1 | Gene: | glu / 35001 | FlyBaseID: | FBgn0015391 | Length: | 1409 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001036015.1 | Gene: | SMC2 / 10592 | HGNCID: | 14011 | Length: | 1197 | Species: | Homo sapiens |
Alignment Length: | 1329 | Identity: | 313/1329 - (23%) |
---|---|---|---|
Similarity: | 548/1329 - (41%) | Gaps: | 289/1329 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 89 ISKIVNRNFKSYAGEVELGPFHQSFTAIIGPNGSGKSNVIDSMMFVFG-CRANRIRCKRVSTLIH 152
Fly 153 SSSSYPNLRSCSVAVHFKQIVDKGDGTCEDVPDSSIVIERTAMSDNSSYYQINDKRAQLKDVAKL 217
Fly 218 LKKHHVDLEHNRFLILQGEVESIAMMKPKGQTENETGMLEYLEDIVGTQRYIRPLQQINQRVDQL 282
Fly 283 TDDRTEKHNRCKLAEREMKD-LEQPFNEAVDYLKKEN------ELVRTKSFHIQKIISIKKSKLE 340
Fly 341 QYTQEHEACAEELKTHDEGTAALKQSRAEKETIIR---KEIEEYEALVKKREQIKKRLVTVESAY 402
Fly 403 TEIQSTMENTNKQ-----RKKDKAQIEKNEKEL-----EDLHKLPEKNQREIEDCNKKLESLEVS 457
Fly 458 KVTLNEELEKQQAELTKTTAPLTEK----RLKLSDELVGLKEKVNTAKGEVQVFESQLKILKQAE 518
Fly 519 TTESRKYETLKSSYEQSQKSLEEKVTRVDELKESIPRMKTEIASKSAEVDKMVKEERNLSMQCNK 583
Fly 584 LRTEI--------NERSSVMQAQRSNNKVLDFLMRMKMEGKIPGILGRLGDLGGIDAKYDIAIST 640
Fly 641 ACG-RLDNIVTDNYETASAAI--GALKEYNVGRATFITLDKIE------HHRREANSRINTPENV 696
Fly 697 PRLYDLVKVEDDRVRTAFYFALRNTLVCDDLEQGTRIAYG-RERYRVVTLRGEMIEMTGTMSGGG 760
Fly 761 SRPIRGKMGTQVRTKTAESADSSQISQKALEDMQIQAEELQARVNYCQEQQGSLEREIQTLKNGL 825
Fly 826 QR------------DEAEYKRLAVSITSLEQQ--------------------------------- 845
Fly 846 -MASNLKQCEAQRQRMLK---------KT---TDERAVKEREEQIEAAKQELEQAQFAEQAVSSQ 897
Fly 898 IEEIQNQYDTLRNESVKPVEAKIKKVNSQIEKLAANVRSLNVGLATADRNITKITGNNNNLRENI 962
Fly 963 KAAEEKLKSLNEDRNKAKEKKEELEKEIEESEASIEGAKSQSSDIKKEIDEITKEENKRNIERIE 1027
Fly 1028 IDTKLQAAAGKMNKVKNDIPGWQAQLAPLKLNEIPGETEPQAPLKELNEEELEAETLEALQYKQT 1092
Fly 1093 MLEE---DLKTKKPNLSCIKEFNEKRLVYLDRVRVL---EDITSKRNE-MRDKYEEVRKRRYKEF 1150
Fly 1151 MDGFSIITRKLKEMYQMITLGGDAELELVDSMDPFTEGVNFTVRPPK---------------KSW 1200
Fly 1201 K-YISNLSGGEKTLSSLALVFALHYYKPSPLYFMDEIDAALDFKNVSIVGHYIKERTKNAQFIIV 1264
Fly 1265 SLRVNMFELAN------FLVGIYKVSDCT 1287 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
glu | NP_723996.1 | ABC_SMC4_euk | 87..>246 | CDD:213241 | 47/157 (30%) |
Smc | 89..1281 | CDD:224117 | 311/1321 (24%) | ||
SMC_hinge | 618..733 | CDD:214944 | 33/123 (27%) | ||
ATP-synt_B | <825..904 | CDD:304375 | 22/136 (16%) | ||
ABC_SMC4_euk | <1196..1290 | CDD:213241 | 36/114 (32%) | ||
SMC2 | NP_001036015.1 | Smc | 1..1168 | CDD:224117 | 311/1323 (24%) |
ABC_SMC2_euk | 1..>172 | CDD:213240 | 51/177 (29%) | ||
Uds1 | <193..287 | CDD:292096 | 24/97 (25%) | ||
L_lactis_ph-MCP | 252..>465 | CDD:115336 | 55/221 (25%) | ||
SMC_hinge | 522..639 | CDD:214944 | 33/124 (27%) | ||
DUF342 | <636..777 | CDD:302792 | 30/163 (18%) | ||
DUF4200 | 740..841 | CDD:290574 | 18/100 (18%) | ||
P-loop_NTPase | <1074..1168 | CDD:304359 | 33/93 (35%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |