DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nubp1 and HCF101

DIOPT Version :10

Sequence 1:NP_609805.1 Gene:Nubp1 / 35000 FlyBaseID:FBgn0032597 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_189086.1 Gene:HCF101 / 822033 AraportID:AT3G24430 Length:532 Species:Arabidopsis thaliana


Alignment Length:266 Identity:82/266 - (30%)
Similarity:126/266 - (47%) Gaps:41/266 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 VKHKLLILSGKGGVGKSTVTSLLTRYLARSNPDSNFGVLDIDICGPSQPRL---------MGALG 109
            :.:.:.:.|.|||||||||...|...||  ...:..|:.|.|:.|||.|.:         |....
plant   175 ISNIIAVSSCKGGVGKSTVAVNLAYTLA--GMGARVGIFDADVYGPSLPTMVNPESRILEMNPEK 237

  Fly   110 ESVHQSGYGWSPVGIEDNVCLMSIGFLLGSVDDAIIWRGPKKNGMIRQFLSEVDWGNLDLLLLDT 174
            :::..:.|    :|::    |:|.||   :.....|.|||..:|:|.|.|:..:||.||.|::|.
plant   238 KTIIPTEY----MGVK----LVSFGF---AGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDM 291

  Fly   175 PPGTSDEHLSVVSYLKDDANPESLRAVMVTTPQEVSLLDVRKEINFCKKQNIPIVGVIENMSSFR 239
            ||||.|..|::.......|      ||:|||||:::.:||.|.:....|..:|.|.|:|||    
plant   292 PPGTGDIQLTLCQVAPLTA------AVIVTTPQKLAFIDVAKGVRMFSKLKVPCVAVVENM---- 346

  Fly   240 CGHCGNSSEIFPAKTGGAAAMCAEMGIPLLGSLPLDQQISKACDSGEDLTEFKNVTTEALEGICS 304
            |....:....:|...|..:.:..:.|||.|..||:...:|.:.|||         |.|.:....|
plant   347 CHFDADGKRYYPFGKGSGSEVVKQFGIPHLFDLPIRPTLSASGDSG---------TPEVVSDPLS 402

  Fly   305 KIMASF 310
            .:..:|
plant   403 DVARTF 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nubp1NP_609805.1 ParA 53..307 CDD:431392 81/261 (31%)
HCF101NP_189086.1 PaaD 73..160 CDD:441754
ParA 174..411 CDD:431392 82/266 (31%)
GBBH-like_N 448..515 CDD:461840
Blue background indicates that the domain is not in the aligned region.

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