DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17904 and nubp1

DIOPT Version :9

Sequence 1:NP_609805.1 Gene:CG17904 / 35000 FlyBaseID:FBgn0032597 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_001015835.1 Gene:nubp1 / 548552 XenbaseID:XB-GENE-992726 Length:320 Species:Xenopus tropicalis


Alignment Length:285 Identity:167/285 - (58%)
Similarity:205/285 - (71%) Gaps:12/285 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PEHCPGVESEEAGKGSACSGCPNQGLCSDPNKKLEDPGKALVVESMKDVKHKLLILSGKGGVGKS 70
            |:||||..|.||||.|||.|||||.:|:.......||....:.|.:..||||:|:||||||||||
 Frog     9 PQHCPGTGSTEAGKSSACQGCPNQSICASGTMSGPDPAIEEIKEKLSSVKHKILVLSGKGGVGKS 73

  Fly    71 TVTSLLTRYLARSNPDSNFGVLDIDICGPSQPRLMGALGESVHQSGYGWSPVGIEDNVCLMSIGF 135
            |.::.|...||: :......:||:||||||.|::||..||.|||||.|||||.:|||:.:||:||
 Frog    74 TFSAHLAHGLAQ-DESKEVALLDVDICGPSIPKMMGLEGEQVHQSGSGWSPVYVEDNLAVMSVGF 137

  Fly   136 LLGSVDDAIIWRGPKKNGMIRQFLSEVDWGNLDLLLLDTPPGTSDEHLSVVSYLK----DDANPE 196
            ||.|.|||:|||||||||||:|||.:||||.:|.|::||||||||||||||.||.    |.    
 Frog   138 LLSSPDDAVIWRGPKKNGMIKQFLRDVDWGEVDYLIIDTPPGTSDEHLSVVQYLSVAGIDG---- 198

  Fly   197 SLRAVMVTTPQEVSLLDVRKEINFCKKQNIPIVGVIENMSSFRCGHCGNSSEIFPAKTGGAAAMC 261
               ||::||||||||.|||||||||.|..:||:||:||||.|.|..|.|.|:|||..||||..||
 Frog   199 ---AVIITTPQEVSLQDVRKEINFCHKVKLPIIGVVENMSGFICPKCKNESQIFPPTTGGAEKMC 260

  Fly   262 AEMGIPLLGSLPLDQQISKACDSGE 286
            .::.:.|||.:|||..|.|:||:|:
 Frog   261 TDLNVSLLGKVPLDPNIGKSCDTGK 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17904NP_609805.1 Mrp 10..282 CDD:223563 161/275 (59%)
ParA 54..307 CDD:287566 145/237 (61%)
nubp1NP_001015835.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 9/13 (69%)
ParA 57..307 CDD:313763 145/237 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 300 1.000 Domainoid score I1413
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1857
Inparanoid 1 1.050 349 1.000 Inparanoid score I2232
OMA 1 1.010 - - QHG53899
OrthoDB 1 1.010 - - D1166096at2759
OrthoFinder 1 1.000 - - FOG0001227
OrthoInspector 1 1.000 - - otm48814
Panther 1 1.100 - - LDO PTHR23264
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R796
SonicParanoid 1 1.000 - - X3047
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1313.110

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