DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG17904 and nubp1

DIOPT Version :9

Sequence 1:	NP_609805.1	Gene:	CG17904 / 35000	FlyBaseID:	FBgn0032597	Length:	311	Species:	Drosophila melanogaster
Sequence 2:	NP_001017538.1	Gene:	nubp1 / 503919	ZFINID:	ZDB-GENE-050417-471	Length:	321	Species:	Danio rerio

Alignment Length:	303	Identity:	180/303 - (59%)
Similarity:	221/303 - (72%)	Gaps:	6/303 - (1%)

- Green bases have known domain annotations that are detailed below.

  Fly     6 PEHCPGVESEEAGKGSACSGCPNQGLCSDPNKKLEDPGKALVVESMKDVKHKLLILSGKGGVGKS 70
            ||||||..|::|||.|||.|||||.:|:....|..||....:.:.|..||||:|:||||||||||
Zfish     9 PEHCPGTSSDQAGKSSACQGCPNQSICASGATKAPDPAIEEIKQKMTSVKHKILVLSGKGGVGKS 73

  Fly    71 TVTSLLTRYLARSNPDSNFGVLDIDICGPSQPRLMGALGESVHQSGYGWSPVGIEDNVCLMSIGF 135
            |.::.|:..|| |:......:||:||||||.|::||..||.|||||.|||||.:|||:.:|||||
Zfish    74 TFSAHLSHALA-SDSSKEVALLDVDICGPSIPKIMGLEGEQVHQSGSGWSPVYVEDNLAVMSIGF 137

  Fly   136 LLGSVDDAIIWRGPKKNGMIRQFLSEVDWGNLDLLLLDTPPGTSDEHLSVVSYLKDDANPESLRA 200
            ||.|.|||:|||||||||||:|||.:||||.:|.|::||||||||||||:|.|| ..|..:.  |
Zfish   138 LLSSPDDAVIWRGPKKNGMIKQFLRDVDWGEVDYLIVDTPPGTSDEHLSIVQYL-SGAGIDG--A 199

  Fly   201 VMVTTPQEVSLLDVRKEINFCKKQNIPIVGVIENMSSFRCGHCGNSSEIFPAKTGGAAAMCAEMG 265
            |::||||||||.||||||.||||.|:||:|||||||.|.|..|.|:|:|||..||||..||.|:.
Zfish   200 VIITTPQEVSLQDVRKEIRFCKKVNLPILGVIENMSGFVCPKCKNTSQIFPPTTGGAQRMCEELN 264

  Fly   266 IPLLGSLPLDQQISKACDSGED-LTEF-KNVTTEALEGICSKI 306
            :||||.:|||.:|.|:||.|:. |||. .:....|.:.|..||
Zfish   265 LPLLGRIPLDPRIGKSCDEGKSFLTEVPDSPAAAAYQSIVQKI 307

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG17904	NP_609805.1	Mrp	10..282	CDD:223563	166/271 (61%)
CG17904	NP_609805.1	ParA	54..307	CDD:287566	157/255 (62%)
nubp1	NP_001017538.1	Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	1..23		9/13 (69%)
		ParA	56..307	CDD:287566	155/254 (61%)
		FlhG	59..317	CDD:223531	155/253 (61%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170585917
Domainoid	1	1.000	309	1.000	Domainoid score	I1312
eggNOG	1	0.900	-	-		E1_COG0489
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H1857
Inparanoid	1	1.050	361	1.000	Inparanoid score	I2157
OMA	1	1.010	-	-		QHG53899
OrthoDB	1	1.010	-	-		D1166096at2759
OrthoFinder	1	1.000	-	-		FOG0001227
OrthoInspector	1	1.000	-	-		oto39663
orthoMCL	1	0.900	-	-		OOG6_100169
Panther	1	1.100	-	-	LDO	PTHR23264
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R796
SonicParanoid	1	1.000	-	-		X3047
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	15	14.840