DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4 and psma6l

DIOPT Version :9

Sequence 1:NP_001260511.1 Gene:Prosbeta4 / 34999 FlyBaseID:FBgn0032596 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_571870.2 Gene:psma6l / 83917 ZFINID:ZDB-GENE-010502-2 Length:252 Species:Danio rerio


Alignment Length:190 Identity:42/190 - (22%)
Similarity:65/190 - (34%) Gaps:60/190 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TLLGIKGPDFVMLAADTTHARSIIVMKEDQNKIHKVSDSLL-ISTV---------------GESG 51
            |.:||:|.|..:|...                 .||||:|| .||:               |...
Zfish    38 TTVGIRGVDCAVLVTQ-----------------KKVSDTLLDASTMTNMFRITPRIGCVMTGHYA 85

  Fly    52 DTEQFTEFISKNIALYKMRNGYDLSPRESAHFTRKNLAEYLRSRT------PYQVFMFVAGYDPN 110
            |:.............:|.:.|||: |.::   ..:.||:..:..|      |....|.:...||.
Zfish    86 DSRSQVHRARIEAGEWKYKFGYDV-PVDA---LCRRLADLSQVYTQNAEMRPLGCCMMLISMDPQ 146

  Fly   111 AGPELTFIDYLANALPVNYAGHGYGAIFASSIYDRYWHPNITQAEAYDVFKKCIAEIQKR 170
            .||.|...|      |..|    :....|:|:       .:...||....:|.|.::||:
Zfish   147 KGPMLYKCD------PAGY----FCGFRATSV-------GVKHTEANSYLEKKIKKMQKK 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4NP_001260511.1 PRE1 1..194 CDD:223711 42/190 (22%)
proteasome_beta_type_2 1..192 CDD:239727 42/190 (22%)
psma6lNP_571870.2 PRE1 7..252 CDD:223711 42/190 (22%)
proteasome_alpha_type_6 8..226 CDD:239723 42/190 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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