DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4 and psmb7

DIOPT Version :9

Sequence 1:NP_001260511.1 Gene:Prosbeta4 / 34999 FlyBaseID:FBgn0032596 Length:201 Species:Drosophila melanogaster
Sequence 2:XP_021324576.1 Gene:psmb7 / 64278 ZFINID:ZDB-GENE-001208-4 Length:286 Species:Danio rerio


Alignment Length:199 Identity:53/199 - (26%)
Similarity:92/199 - (46%) Gaps:10/199 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TLLGIKGPDFVMLAADTTHARSIIVMKEDQNKIHKVSDSLLISTVGESGDTEQFTEFISKNIALY 67
            |:.||...|.|:|.|||.....:||..::.:|||.:|.::.....|.:.|||..|:.||.|:.|:
Zfish    45 TICGIVYKDGVVLGADTRATEGMIVADKNCSKIHYISPNIYCCGAGTAADTEMTTQIISSNLELH 109

  Fly    68 KMRNGYDLSPRESAHFTRKNLAEYLRSRTPYQVFM---FVAGYDPNAGPELTFIDYLANALPVNY 129
            .:..|  ..||.:   |...:.:.:..|  ||.::   .|.|.....||.|..|....:...:.|
Zfish   110 SLSTG--RLPRVA---TANRMLKQMLFR--YQGYIGAALVLGGVDCTGPHLYSIYPHGSTDKLPY 167

  Fly   130 AGHGYGAIFASSIYDRYWHPNITQAEAYDVFKKCIAEIQKRLVVNLKNFTVAVVDKDGVRDLEPI 194
            ...|.|::.|.::::..:.|::.:.:|..:.:..||......:.:..|..|.|:.|..|..|.|.
Zfish   168 VTMGSGSLAAMAVFEDRYRPDMEEEDAKSLVRDAIAAGIFNDLGSGSNIDVCVITKGKVDYLRPH 232

  Fly   195 SAAS 198
            ..|:
Zfish   233 DIAN 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4NP_001260511.1 PRE1 1..194 CDD:223711 51/193 (26%)
proteasome_beta_type_2 1..192 CDD:239727 50/191 (26%)
psmb7XP_021324576.1 proteasome_beta_type_7 44..232 CDD:239732 51/193 (26%)
Pr_beta_C 237..280 CDD:315191 53/199 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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