DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4 and PSMB10

DIOPT Version :9

Sequence 1:NP_001260511.1 Gene:Prosbeta4 / 34999 FlyBaseID:FBgn0032596 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_002792.1 Gene:PSMB10 / 5699 HGNCID:9538 Length:273 Species:Homo sapiens


Alignment Length:201 Identity:47/201 - (23%)
Similarity:81/201 - (40%) Gaps:18/201 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TLLGIKGPDFVMLAADTTHARSIIVMKEDQNKIHKVSDSLLISTVGESGDTEQFTEFISKNIALY 67
            |:.|:...|.|:|.|||......:|..:...|||.::..:.....|.:.|.|..|..::..:.|:
Human    41 TIAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADAEMTTRMVASKMELH 105

  Fly    68 KMRNGYDLSPRESAHFTRKNLAEYLRSRTPYQVFMFVAGYDPNAGPELTFI----DYLANALPVN 128
            .:..|.:..........|:.|..|   :......:.|.|.| ..||:|..:    .|  :.||..
Human   106 ALSTGREPRVATVTRILRQTLFRY---QGHVGASLIVGGVD-LTGPQLYGVHPHGSY--SRLPFT 164

  Fly   129 YAGHGYGAIFASSIYDRYWHPNITQAEAYDVFKKCIAEIQKRLVVNL---KNFTVAVVDKDGVRD 190
            ..|.|..|..| .:.||: .||:|...|..:.   :..:...::.:|   .|....|:.|.|.:.
Human   165 ALGSGQDAALA-VLEDRF-QPNMTLEAAQGLL---VEAVTAGILGDLGSGGNVDACVITKTGAKL 224

  Fly   191 LEPISA 196
            |..:|:
Human   225 LRTLSS 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4NP_001260511.1 PRE1 1..194 CDD:223711 46/197 (23%)
proteasome_beta_type_2 1..192 CDD:239727 45/195 (23%)
PSMB10NP_002792.1 proteasome_beta_type_7 40..227 CDD:239732 46/196 (23%)
Pr_beta_C 232..267 CDD:403609
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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