DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4 and PSMB5

DIOPT Version :10

Sequence 1:NP_609804.1 Gene:Prosbeta4 / 34999 FlyBaseID:FBgn0032596 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_002788.1 Gene:PSMB5 / 5693 HGNCID:9542 Length:263 Species:Homo sapiens


Alignment Length:204 Identity:47/204 - (23%)
Similarity:85/204 - (41%) Gaps:25/204 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TLLGIKGPDFVMLAADTTHARSIIVMKEDQNKIHKVSDSLLISTVGESGDTEQFTEFISKNIALY 67
            |.|..|....|::|||:.......:..:...|:.:::..||.:..|.:.|...:...:::...:|
Human    61 TTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIY 125

  Fly    68 KMRNGYDLSPRESAHFTRKNLAEYLRSRTPYQ-------VFMFVAGYDPNAGPELTFIDYLANAL 125
            ::||    ..|.|.....|.||..:     ||       :...:.|:| ..||.|.::|...|.:
Human   126 ELRN----KERISVAAASKLLANMV-----YQYKGMGLSMGTMICGWD-KRGPGLYYVDSEGNRI 180

  Fly   126 PVNYAGHGYGAIFASSIYDRYWHPNITQAEAYDVFKKCIAEIQKR-----LVVNLKNFTV---AV 182
            .......|.|:::|..:.||.:..::...:|||:.::.|.:...|     ..|||.:...   ..
Human   181 SGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIR 245

  Fly   183 VDKDGVRDL 191
            |..|.|.||
Human   246 VSSDNVADL 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4NP_609804.1 proteasome_beta_type_2 1..192 CDD:239727 47/204 (23%)
PSMB5NP_002788.1 proteasome_beta_type_5 60..247 CDD:239730 42/195 (22%)

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