DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta4 and PSMB5

DIOPT Version :9

Sequence 1:NP_001260511.1 Gene:Prosbeta4 / 34999 FlyBaseID:FBgn0032596 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_002788.1 Gene:PSMB5 / 5693 HGNCID:9542 Length:263 Species:Homo sapiens


Alignment Length:204 Identity:47/204 - (23%)
Similarity:85/204 - (41%) Gaps:25/204 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TLLGIKGPDFVMLAADTTHARSIIVMKEDQNKIHKVSDSLLISTVGESGDTEQFTEFISKNIALY 67
            |.|..|....|::|||:.......:..:...|:.:::..||.:..|.:.|...:...:::...:|
Human    61 TTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIY 125

  Fly    68 KMRNGYDLSPRESAHFTRKNLAEYLRSRTPYQ-------VFMFVAGYDPNAGPELTFIDYLANAL 125
            ::||    ..|.|.....|.||..:     ||       :...:.|:| ..||.|.::|...|.:
Human   126 ELRN----KERISVAAASKLLANMV-----YQYKGMGLSMGTMICGWD-KRGPGLYYVDSEGNRI 180

  Fly   126 PVNYAGHGYGAIFASSIYDRYWHPNITQAEAYDVFKKCIAEIQKR-----LVVNLKNFTV---AV 182
            .......|.|:::|..:.||.:..::...:|||:.::.|.:...|     ..|||.:...   ..
Human   181 SGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDGWIR 245

  Fly   183 VDKDGVRDL 191
            |..|.|.||
Human   246 VSSDNVADL 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4NP_001260511.1 PRE1 1..194 CDD:223711 47/204 (23%)
proteasome_beta_type_2 1..192 CDD:239727 47/204 (23%)
PSMB5NP_002788.1 proteasome_beta_type_5 60..247 CDD:239730 42/195 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.