DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4 and PSMB1

DIOPT Version :10

Sequence 1:NP_609804.1 Gene:Prosbeta4 / 34999 FlyBaseID:FBgn0032596 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_002784.1 Gene:PSMB1 / 5689 HGNCID:9537 Length:241 Species:Homo sapiens


Alignment Length:202 Identity:45/202 - (22%)
Similarity:79/202 - (39%) Gaps:12/202 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TLLGIKGPDFVMLAADTTHARSIIVMKEDQNKIHKVSDSLLISTVGESGDTEQFTEFISKNIALY 67
            |:|.|.|.||.::|:||..:....:...|..|.:|::|..:|...|..||....|:.|...:.:|
Human    39 TILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMY 103

  Fly    68 KMRNGYDLSPRESAHFTRKNLAEYLRSRTPYQVFMFVAGYDPNAGPELTFIDYLANALPVNYAGH 132
            |..|...::....|......|  |.|...||.|:..:.|.|......:...|.:.:....::...
Human   104 KHSNNKAMTTGAIAAMLSTIL--YSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAG 166

  Fly   133 GYGAIFASSIYD---------RYWHPNITQAEAYDVFKKCIAEIQKRLVVNLKNFTVAVVDKDGV 188
            |..:.....:.|         ...|..::...|..:.|.......:|.|.......:.:|.|:|:
Human   167 GSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEGI 231

  Fly   189 RDLEPIS 195
            |: |.:|
Human   232 RE-ETVS 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4NP_609804.1 proteasome_beta_type_2 1..192 CDD:239727 43/197 (22%)
PSMB1NP_002784.1 proteasome_beta_type_1 30..241 CDD:239726 45/202 (22%)

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