DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Prosbeta4 and psmb2

DIOPT Version :9

Sequence 1:	NP_001260511.1	Gene:	Prosbeta4 / 34999	FlyBaseID:	FBgn0032596	Length:	201	Species:	Drosophila melanogaster
Sequence 2:	NP_001002609.1	Gene:	psmb2 / 436882	ZFINID:	ZDB-GENE-040718-353	Length:	199	Species:	Danio rerio

Alignment Length:	194	Identity:	107/194 - (55%)
Similarity:	145/194 - (74%)	Gaps:	0/194 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 METLLGIKGPDFVMLAADTTHARSIIVMKEDQNKIHKVSDSLLISTVGESGDTEQFTEFISKNIA 65
            ||.|:||:|||||::|||...|.|||.||.|.:|:.|:|:.:|:..|||:|||.||.|:|.||:.
Zfish     1 MEYLIGIQGPDFVLVAADNVAASSIIQMKHDYDKMFKLSEKILLLCVGEAGDTVQFAEYIQKNVQ 65

  Fly    66 LYKMRNGYDLSPRESAHFTRKNLAEYLRSRTPYQVFMFVAGYDPNAGPELTFIDYLANALPVNYA 130
            ||||||||:|||..:|:|||||||:||||||||.|.:.:||||...||.|.::|||:......:|
Zfish    66 LYKMRNGYELSPAAAANFTRKNLADYLRSRTPYHVNLLLAGYDETDGPGLYYMDYLSALAKAPFA 130

  Fly   131 GHGYGAIFASSIYDRYWHPNITQAEAYDVFKKCIAEIQKRLVVNLKNFTVAVVDKDGVRDLEPI 194
            .|||||....||.|||:.|::|:.||.|:.|||:.|:.||.::||.:|||.::||||:.|:|.:
Zfish   131 AHGYGAFLTLSILDRYYRPDLTREEAVDLLKKCLEELNKRFILNLPSFTVRLIDKDGIHDMEKL 194

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Prosbeta4	NP_001260511.1	PRE1	1..194	CDD:223711	107/192 (56%)
Prosbeta4	NP_001260511.1	proteasome_beta_type_2	1..192	CDD:239727	106/190 (56%)
psmb2	NP_001002609.1	proteasome_beta_type_2	1..192	CDD:239727	106/190 (56%)
psmb2	NP_001002609.1	PRE1	5..188	CDD:223711	101/182 (55%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170580859
Domainoid	1	1.000	210	1.000	Domainoid score	I2770
eggNOG	1	0.900	-	-		E1_COG0638
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H2088
Inparanoid	1	1.050	231	1.000	Inparanoid score	I3423
OMA	1	1.010	-	-		QHG53714
OrthoDB	1	1.010	-	-		D1392180at2759
OrthoFinder	1	1.000	-	-		FOG0002770
OrthoInspector	1	1.000	-	-		otm26564
orthoMCL	1	0.900	-	-		OOG6_102061
Panther	1	1.100	-	-	LDO	PTHR11599
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1010
SonicParanoid	1	1.000	-	-		X1860
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	16	15.800