DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4 and Prosalpha7

DIOPT Version :9

Sequence 1:NP_001260511.1 Gene:Prosbeta4 / 34999 FlyBaseID:FBgn0032596 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster


Alignment Length:127 Identity:27/127 - (21%)
Similarity:55/127 - (43%) Gaps:19/127 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TLLGIKGPDFVMLAADTTHARSIIVMK----EDQNKIHKVSDSLLISTVGESGDTEQFTEFISKN 63
            |::||:|.|.|:||.:     .||..|    :...:|..:..::.::..|...|.....:...:.
  Fly    36 TVIGIRGKDAVVLAVE-----KIITSKLYEPDAGGRIFTIEKNIGMAVAGLVADGNFVADIARQE 95

  Fly    64 IALYKMRNGYDLSPRESAHFTRKNLAEYLRSRT------PYQVFMFVAGYDPNAGPELTFID 119
            .|.|:.:....:..:...|    .:|.|:.:.|      |:.:.:.:|.:|...||:|..|:
  Fly    96 AANYRQQFEQAIPLKHLCH----RVAGYVHAYTLYSAVRPFGLSIILASWDEVEGPQLYKIE 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4NP_001260511.1 PRE1 1..194 CDD:223711 27/127 (21%)
proteasome_beta_type_2 1..192 CDD:239727 27/127 (21%)
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 27/127 (21%)
PRE1 6..231 CDD:223711 27/127 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441005
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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