DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4 and Prosbeta5R2

DIOPT Version :9

Sequence 1:NP_001260511.1 Gene:Prosbeta4 / 34999 FlyBaseID:FBgn0032596 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001286022.1 Gene:Prosbeta5R2 / 318924 FlyBaseID:FBgn0051742 Length:279 Species:Drosophila melanogaster


Alignment Length:195 Identity:44/195 - (22%)
Similarity:86/195 - (44%) Gaps:16/195 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TLLGIKGPDFVMLAADTTHARSIIVMKEDQNKIHKVSDSLLISTVGESGDTEQFTEFISKNIALY 67
            |.:|......::|..|:......::..:..:|:.:|:..::.:|.|.:.|...:...:::...|:
  Fly    73 TTVGFVYQGGIILCVDSRATSGKLIGSQSIHKVVQVNQYIMGTTAGGAADCTYWDRALTRECRLH 137

  Fly    68 KMRNGYDLSPRESAHFTRKNLAEYLRSRTPYQVFMFVAGYDPNAGPELTFIDYLANALPVN--YA 130
            ::|....|..:.:|.:.....|||  ......:.|.:||:.|. ||.|.::|  :|.|.::  ..
  Fly   138 ELRYKERLPVQSAAKYISNVAAEY--KGMGLCMGMMLAGWSPE-GPSLVYVD--SNGLRIHGKLF 197

  Fly   131 GHGYGAIFASSIYDRYWHPNITQAEAYD-----VFKKCIAEIQKRLVVNLKNFTVA----VVDKD 186
            ..|.||..|..|.|..:..:::..||||     |:...:.:|....||.|.:....    |.:||
  Fly   198 AVGSGAPNALGILDSDYRLDLSDNEAYDLAFLAVYHATMTDIFSGGVVRLYHMDQGNWRNVANKD 262

  Fly   187  186
              Fly   263  262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4NP_001260511.1 PRE1 1..194 CDD:223711 44/195 (23%)
proteasome_beta_type_2 1..192 CDD:239727 44/195 (23%)
Prosbeta5R2NP_001286022.1 PTZ00488 46..279 CDD:185666 44/195 (23%)
proteasome_beta_type_5 72..259 CDD:239730 41/190 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440942
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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