DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4 and Psma7

DIOPT Version :10

Sequence 1:NP_609804.1 Gene:Prosbeta4 / 34999 FlyBaseID:FBgn0032596 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_036099.1 Gene:Psma7 / 26444 MGIID:1347070 Length:248 Species:Mus musculus


Alignment Length:216 Identity:46/216 - (21%)
Similarity:90/216 - (41%) Gaps:64/216 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TLLGIKGPDFVMLAADTTHARSIIVMKEDQ--NKIHKVSDSLLISTVGESGD------------- 52
            |.:|::|.|.|:|..:   .:|:..:::::  .||..:.|::.::..|.:.|             
Mouse    31 TAVGVRGKDIVVLGVE---KKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQ 92

  Fly    53 TEQFT-------EFISKNIALYKMRNGYDLSPRESAHFTRKNLAEYLRSRTPYQVFMFVAGYDPN 110
            :.:.|       |:|::.||..|.|            :|:.|      .|.|:.:...:.|:|.:
Mouse    93 SHRLTVEDPVTVEYITRYIASLKQR------------YTQSN------GRRPFGISALIVGFDFD 139

  Fly   111 AGPEL-------TFIDYLANALPVNYAGHGYGAIFASSIYDRYWHPNITQ--AEAYDVFKKCIAE 166
            ..|.|       |:..:.|||:     |.|     |.|:.: :...|.|.  .|..|:..|.:.:
Mouse   140 GTPRLYQTDPSGTYHAWKANAI-----GRG-----AKSVRE-FLEKNYTDDAIETDDLTIKLVIK 193

  Fly   167 IQKRLVVN-LKNFTVAVVDKD 186
            ....:|.: .||..:||:.:|
Mouse   194 ALLEVVQSGGKNIELAVMRRD 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4NP_609804.1 proteasome_beta_type_2 1..192 CDD:239727 46/216 (21%)
Psma7NP_036099.1 proteasome_alpha_type_7 3..211 CDD:239724 44/211 (21%)

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