DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4 and SPAC31A2.04c

DIOPT Version :9

Sequence 1:NP_001260511.1 Gene:Prosbeta4 / 34999 FlyBaseID:FBgn0032596 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_592916.1 Gene:SPAC31A2.04c / 2543122 PomBaseID:SPAC31A2.04c Length:194 Species:Schizosaccharomyces pombe


Alignment Length:192 Identity:87/192 - (45%)
Similarity:128/192 - (66%) Gaps:1/192 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 METLLGIKGPDFVMLAADTTHARSIIVMKEDQNKIHKVSDSLLISTVGESGDTEQFTEFISKNIA 65
            ||:||.::|.|||:.|:.::..|.|.|:|.|.:|...::...|:...||:|||..|.|:|:.||:
pombe     1 MESLLAVQGQDFVLTASSSSAVRGITVLKPDDDKSQILNSHNLMLYCGEAGDTTNFAEYIAANIS 65

  Fly    66 LYKMRNGYDLSPRESAHFTRKNLAEYLRSRTPYQVFMFVAGYDPNAG-PELTFIDYLANALPVNY 129
            ||.:|:..:|||..:|.||||.||..||||.||||.:.:|||:.|.| |||.::||||..:.|.|
pombe    66 LYTLRHNLNLSPEATASFTRKQLATSLRSRKPYQVNILLAGYETNLGKPELFWLDYLATCVRVPY 130

  Fly   130 AGHGYGAIFASSIYDRYWHPNITQAEAYDVFKKCIAEIQKRLVVNLKNFTVAVVDKDGVRDL 191
            |..||.:.:..||:|||:.|::|..||..:.|.|..|::||:.::.|.|...||||||:|::
pombe   131 ACQGYSSFYCLSIFDRYYKPDLTIDEAVRIMKLCFDELKKRMPIDFKGFICKVVDKDGIREI 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4NP_001260511.1 PRE1 1..194 CDD:223711 87/192 (45%)
proteasome_beta_type_2 1..192 CDD:239727 87/192 (45%)
SPAC31A2.04cNP_592916.1 proteasome_beta_type_2 1..194 CDD:239727 87/192 (45%)
PRE1 1..189 CDD:223711 85/187 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 156 1.000 Domainoid score I1042
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2088
Inparanoid 1 1.050 175 1.000 Inparanoid score I1161
OMA 1 1.010 - - QHG53714
OrthoFinder 1 1.000 - - FOG0002770
OrthoInspector 1 1.000 - - otm47148
orthoMCL 1 0.900 - - OOG6_102061
Panther 1 1.100 - - LDO PTHR11599
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1010
SonicParanoid 1 1.000 - - X1860
TreeFam 1 0.960 - -
1413.860

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