DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta4 and pbs-6

DIOPT Version :9

Sequence 1:NP_001260511.1 Gene:Prosbeta4 / 34999 FlyBaseID:FBgn0032596 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_498806.1 Gene:pbs-6 / 176161 WormBaseID:WBGene00003952 Length:258 Species:Caenorhabditis elegans


Alignment Length:139 Identity:36/139 - (25%)
Similarity:60/139 - (43%) Gaps:28/139 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IKGPDFVMLAADTTHARS-IIVMKEDQNKIHKVSDSLLISTVGESGDTEQFTEFISKNIALYKMR 70
            |.|.:|.::|:||...:: |.::..|..||..::|:::::|.|..||..|..:.:...:..|:..
 Worm    57 ISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKVLQSRLHKYRFD 121

  Fly    71 NGYDLSPRESAHFTRKNLAEYLRSRTPYQVFMFVAGYDPNAGPELTFIDYLANALPVNYAGHGYG 135
            ...|:|....|....:||  |.|...||.....:||.|.                      ||.|
 Worm   122 YRSDMSVDLCAELLSRNL--YYRRFFPYYTGAILAGIDE----------------------HGKG 162

  Fly   136 AIFASSIYD 144
            |:|:   ||
 Worm   163 AVFS---YD 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta4NP_001260511.1 PRE1 1..194 CDD:223711 36/139 (26%)
proteasome_beta_type_2 1..192 CDD:239727 36/139 (26%)
pbs-6NP_498806.1 PRE1 38..246 CDD:223711 36/139 (26%)
Ntn_hydrolase 44..258 CDD:294319 36/139 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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