DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17996 and CMC1

DIOPT Version :10

Sequence 1:NP_609803.1 Gene:CG17996 / 34998 FlyBaseID:FBgn0032595 Length:118 Species:Drosophila melanogaster
Sequence 2:NP_012785.2 Gene:CMC1 / 853721 SGDID:S000001620 Length:111 Species:Saccharomyces cerevisiae


Alignment Length:83 Identity:26/83 - (31%)
Similarity:38/83 - (45%) Gaps:13/83 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 RDRAKTEF---CSKEVADFQECCKASSILMVATCRKQNSALKECLTQWYQNEAFKEECKQIYLQE 100
            |...|||.   |:..|....:|.||:.:.:..||.||...:|.||. :||.:       :.||..
Yeast    31 RKNLKTETYKKCANFVQAMADCAKANGMKVFPTCDKQRDEMKSCLL-FYQTD-------EKYLDG 87

  Fly   101 RADYRSTGIPKKHRLEKL 118
            ..|  ...:.|.::||||
Yeast    88 ERD--KIVLEKINKLEKL 103

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17996NP_609803.1 Cmc1 34..103 CDD:400756 20/66 (30%)
CMC1NP_012785.2 Cmc1 30..97 CDD:400756 21/75 (28%)

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