DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment VhaSFD and atp6v1h

DIOPT Version :9

Sequence 1:NP_723992.1 Gene:VhaSFD / 34997 FlyBaseID:FBgn0027779 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_001016182.1 Gene:atp6v1h / 548936 XenbaseID:XB-GENE-1015115 Length:479 Species:Xenopus tropicalis


Alignment Length:520 Identity:256/520 - (49%)
Similarity:344/520 - (66%) Gaps:60/520 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IDMIAATSVLQQQAADIRTRTINWASYMQSQMISEEDYKAI----SALDKSRASFLAQNSSQVVK 72
            :|....|:::..:||::|...:||.||:|.||||.||.:.|    ::|.:.:...|....:|..|
 Frog     7 VDAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISGEDCEFIKRFETSLPEDKQIILTNEGNQCAK 71

  Fly    73 TLLNLVSHLSKDSTIQYILVLLDDLLQEDRSRVDLFHDTAGKLKQCIWGPFLNLLNRQDGFIVNM 137
            |.:||::|:||:.|:||||.::||:|||:..||.:|.|.|.:.|...|..||.:|||||.|.|:|
 Frog    72 TFINLMTHISKEQTVQYILTMVDDMLQENHQRVSIFFDYARRGKNTAWSYFLPMLNRQDLFTVHM 136

  Fly   138 SSRILAKFACWGHETMPKSDLNFYLQFLKDQLASNGLAYLQEMAQLAKRTQTILVHTHGKDKDHH 202
            ::||:||.|.||.|.|..||||:|..::|.||:|..|                            
 Frog   137 AARIIAKLAAWGRELMEGSDLNYYFNWIKTQLSSQKL---------------------------- 173

  Fly   203 GHQYSPTLAQLQQQHELAERANESYREVGVGSDHQQQDGKCVIPNNEYIQSVARCLQMMLRVDEY 267
                               |...|..|.|..|...         :::|:|.||.|||:||||:||
 Frog   174 -------------------RGGVSAVETGTVSPSD---------SSQYVQCVAGCLQLMLRVNEY 210

  Fly   268 RFAFVGVDGISTLIRILSTRVNFQVQYQLIFCLWVLTFNPLLAAKMNKFSVIPILADILSDCAKE 332
            |||:|..||::.::.:||.:..||:|||:|||||:|.|:|.:...:.:::::|:|:|||.:..||
 Frog   211 RFAWVEADGVNCIMSVLSNKCGFQLQYQMIFCLWLLAFSPQMCEYLRRYNIVPVLSDILQESVKE 275

  Fly   333 KVTRIILAVFRNLIEKPEDSSVAKDHCIAMVQCKVLKQLSILEQRRFDDEDITADVEYLSEKLQN 397
            ||||||||.|:||:||..:....:::.:||:||||||||..|||:::|||||..|:::|.|||..
 Frog   276 KVTRIILAAFKNLLEKSTERETRQEYALAMIQCKVLKQLENLEQQKYDDEDIVEDIKFLLEKLGE 340

  Fly   398 SVQDLSSFDEYATEVRSGRLEWSPVHKSAKFWRENAQRLNEKNYELLRILVHLLETSKDAIILSV 462
            |||||||||||::|::||||||||||||.|||||||.||||||||||:||..|||.|.|..:|:|
 Frog   341 SVQDLSSFDEYSSELKSGRLEWSPVHKSEKFWRENAARLNEKNYELLKILTKLLEVSDDPQVLAV 405

  Fly   463 ACFDIGEYVRHYPRGKHVLEQLGGKQIVMQHLGHEDPNVRYEALLAVQKLMVHNWEYLGKQLEKE 527
            |..|||||||||||||.|:|||.|||:||.|:.|||..|||.||||||||||||||||||||:.|
 Frog   406 AAHDIGEYVRHYPRGKRVIEQLDGKQLVMNHMHHEDQQVRYNALLAVQKLMVHNWEYLGKQLQSE 470

  Fly   528  527
             Frog   471  470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaSFDNP_723992.1 VATPase_H 19..518 CDD:238159 245/502 (49%)
atp6v1hNP_001016182.1 VATPase_H 14..461 CDD:238159 245/502 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 309 1.000 Domainoid score I1328
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7139
Inparanoid 1 1.050 521 1.000 Inparanoid score I1237
OMA 1 1.010 - - QHG54625
OrthoDB 1 1.010 - - D352854at33208
OrthoFinder 1 1.000 - - FOG0004292
OrthoInspector 1 1.000 - - oto105403
Panther 1 1.100 - - LDO PTHR10698
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3548
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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