DRSC/TRiP Functional Genomics Resources

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Protein Alignment VhaSFD and atp6v1h

DIOPT Version :10

Sequence 1:NP_723992.1 Gene:VhaSFD / 34997 FlyBaseID:FBgn0027779 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_001278637.1 Gene:atp6v1h / 286779 ZFINID:ZDB-GENE-021219-2 Length:481 Species:Danio rerio


Alignment Length:529 Identity:258/529 - (48%)
Similarity:347/529 - (65%) Gaps:60/529 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IDMIAATSVLQQQAADIRTRTINWASYMQSQMISEEDYKAISALD----KSRASFLAQNSSQVVK 72
            :|....|:::..:||::|...:||.||:|.||||.||.:.|...:    :.:.:.|.....|..|
Zfish     7 VDAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISGEDCEFIKKFEVAGSEDKQAILTNEGHQCAK 71

  Fly    73 TLLNLVSHLSKDSTIQYILVLLDDLLQEDRSRVDLFHDTAGKLKQCIWGPFLNLLNRQDGFIVNM 137
            |.|||::|:||:.|:||||.|:||.|||:..||::|.|.|.|.|...|..||.:|||||.|.|:|
Zfish    72 TFLNLMAHISKEQTVQYILTLIDDTLQENHQRVNIFFDYAKKTKNTAWSYFLPMLNRQDLFTVHM 136

  Fly   138 SSRILAKFACWGHETMPKSDLNFYLQFLKDQLASNGLAYLQEMAQLAKRTQTILVHTHGKDKDHH 202
            ::||:||.|.||.:.|..||||:|..::|.||:|..|                           |
Zfish   137 AARIIAKLAAWGRDLMEGSDLNYYFNWIKTQLSSQKL---------------------------H 174

  Fly   203 GHQYSPTLAQLQQQHELAERANESYREVGVGSDHQQQDGKCVIPNNEYIQSVARCLQMMLRVDEY 267
            |....|                      |.|:....:       :::|:|.||.|||:||||:||
Zfish   175 GTGAEP----------------------GTGTISPSE-------SSQYVQCVAGCLQLMLRVNEY 210

  Fly   268 RFAFVGVDGISTLIRILSTRVNFQVQYQLIFCLWVLTFNPLLAAKMNKFSVIPILADILSDCAKE 332
            |||:|..||::.:..:||.:..||:|||:|||:|:|.|:|.|..::.:::|:|.|:|||.:..||
Zfish   211 RFAWVEADGVNCITAVLSNKCGFQLQYQMIFCVWLLAFSPQLCEQLRRYNVVPALSDILQESVKE 275

  Fly   333 KVTRIILAVFRNLIEKPEDSSVAKDHCIAMVQCKVLKQLSILEQRRFDDEDITADVEYLSEKLQN 397
            ||||||||.||||:||..:....:::.:||:||||||||..|:|:::||||||.|:::|.|:|..
Zfish   276 KVTRIILAAFRNLLEKSAERETRQEYALAMIQCKVLKQLENLDQQKYDDEDITDDIKFLLERLGE 340

  Fly   398 SVQDLSSFDEYATEVRSGRLEWSPVHKSAKFWRENAQRLNEKNYELLRILVHLLETSKDAIILSV 462
            |||||||||||::|::||||||||||||.|||||||.||||||||||:||..|||.|.|..:::|
Zfish   341 SVQDLSSFDEYSSELKSGRLEWSPVHKSEKFWRENAVRLNEKNYELLKILTRLLEVSDDPQVIAV 405

  Fly   463 ACFDIGEYVRHYPRGKHVLEQLGGKQIVMQHLGHEDPNVRYEALLAVQKLMVHNWEYLGKQLEKE 527
            |..|:|||||||||||.|:|||||||:||.|:.|||..|||.||||||||||||||||||||:..
Zfish   406 AAHDVGEYVRHYPRGKRVIEQLGGKQLVMNHMHHEDQLVRYNALLAVQKLMVHNWEYLGKQLQST 470

  Fly   528 NENQKQGAA 536
            .:.....||
Zfish   471 EQTTPAVAA 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaSFDNP_723992.1 VATPase_H 19..518 CDD:238159 246/502 (49%)
atp6v1hNP_001278637.1 VATPase_H 14..461 CDD:238159 246/502 (49%)

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