DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment VhaSFD and atp6v1h

DIOPT Version :9

Sequence 1:NP_723992.1 Gene:VhaSFD / 34997 FlyBaseID:FBgn0027779 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_001278637.1 Gene:atp6v1h / 286779 ZFINID:ZDB-GENE-021219-2 Length:481 Species:Danio rerio


Alignment Length:529 Identity:258/529 - (48%)
Similarity:347/529 - (65%) Gaps:60/529 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IDMIAATSVLQQQAADIRTRTINWASYMQSQMISEEDYKAISALD----KSRASFLAQNSSQVVK 72
            :|....|:::..:||::|...:||.||:|.||||.||.:.|...:    :.:.:.|.....|..|
Zfish     7 VDAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISGEDCEFIKKFEVAGSEDKQAILTNEGHQCAK 71

  Fly    73 TLLNLVSHLSKDSTIQYILVLLDDLLQEDRSRVDLFHDTAGKLKQCIWGPFLNLLNRQDGFIVNM 137
            |.|||::|:||:.|:||||.|:||.|||:..||::|.|.|.|.|...|..||.:|||||.|.|:|
Zfish    72 TFLNLMAHISKEQTVQYILTLIDDTLQENHQRVNIFFDYAKKTKNTAWSYFLPMLNRQDLFTVHM 136

  Fly   138 SSRILAKFACWGHETMPKSDLNFYLQFLKDQLASNGLAYLQEMAQLAKRTQTILVHTHGKDKDHH 202
            ::||:||.|.||.:.|..||||:|..::|.||:|..|                           |
Zfish   137 AARIIAKLAAWGRDLMEGSDLNYYFNWIKTQLSSQKL---------------------------H 174

  Fly   203 GHQYSPTLAQLQQQHELAERANESYREVGVGSDHQQQDGKCVIPNNEYIQSVARCLQMMLRVDEY 267
            |....|                      |.|:....:       :::|:|.||.|||:||||:||
Zfish   175 GTGAEP----------------------GTGTISPSE-------SSQYVQCVAGCLQLMLRVNEY 210

  Fly   268 RFAFVGVDGISTLIRILSTRVNFQVQYQLIFCLWVLTFNPLLAAKMNKFSVIPILADILSDCAKE 332
            |||:|..||::.:..:||.:..||:|||:|||:|:|.|:|.|..::.:::|:|.|:|||.:..||
Zfish   211 RFAWVEADGVNCITAVLSNKCGFQLQYQMIFCVWLLAFSPQLCEQLRRYNVVPALSDILQESVKE 275

  Fly   333 KVTRIILAVFRNLIEKPEDSSVAKDHCIAMVQCKVLKQLSILEQRRFDDEDITADVEYLSEKLQN 397
            ||||||||.||||:||..:....:::.:||:||||||||..|:|:::||||||.|:::|.|:|..
Zfish   276 KVTRIILAAFRNLLEKSAERETRQEYALAMIQCKVLKQLENLDQQKYDDEDITDDIKFLLERLGE 340

  Fly   398 SVQDLSSFDEYATEVRSGRLEWSPVHKSAKFWRENAQRLNEKNYELLRILVHLLETSKDAIILSV 462
            |||||||||||::|::||||||||||||.|||||||.||||||||||:||..|||.|.|..:::|
Zfish   341 SVQDLSSFDEYSSELKSGRLEWSPVHKSEKFWRENAVRLNEKNYELLKILTRLLEVSDDPQVIAV 405

  Fly   463 ACFDIGEYVRHYPRGKHVLEQLGGKQIVMQHLGHEDPNVRYEALLAVQKLMVHNWEYLGKQLEKE 527
            |..|:|||||||||||.|:|||||||:||.|:.|||..|||.||||||||||||||||||||:..
Zfish   406 AAHDVGEYVRHYPRGKRVIEQLGGKQLVMNHMHHEDQLVRYNALLAVQKLMVHNWEYLGKQLQST 470

  Fly   528 NENQKQGAA 536
            .:.....||
Zfish   471 EQTTPAVAA 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaSFDNP_723992.1 VATPase_H 19..518 CDD:238159 246/502 (49%)
atp6v1hNP_001278637.1 VATPase_H 14..461 CDD:238159 246/502 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577576
Domainoid 1 1.000 309 1.000 Domainoid score I1311
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7139
Inparanoid 1 1.050 520 1.000 Inparanoid score I1224
OMA 1 1.010 - - QHG54625
OrthoDB 1 1.010 - - D352854at33208
OrthoFinder 1 1.000 - - FOG0004292
OrthoInspector 1 1.000 - - oto39252
orthoMCL 1 0.900 - - OOG6_101800
Panther 1 1.100 - - LDO PTHR10698
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1635
SonicParanoid 1 1.000 - - X3548
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.900

Return to query results.
Submit another query.