DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment VhaSFD and vma13

DIOPT Version :9

Sequence 1:NP_723992.1 Gene:VhaSFD / 34997 FlyBaseID:FBgn0027779 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_593848.1 Gene:vma13 / 2541906 PomBaseID:SPAC7D4.10 Length:450 Species:Schizosaccharomyces pombe


Alignment Length:528 Identity:146/528 - (27%)
Similarity:241/528 - (45%) Gaps:111/528 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTTALYLPEENIDMIAATSVLQQQAADIRTRTINWASYMQSQMISEEDYKAISAL-DKSRASFL- 63
            ::.|...|...:|    .|.:.:...::|...|.|..|.:|..:.|.:.:.|..| .|..:::: 
pombe     8 LSNAASPPPVELD----NSQVDEIINNVRCVAIPWQGYQRSGSLEENELQEIENLTGKPLSAYVK 68

  Fly    64 -AQNSSQVVKTL-LNLVSHLSKDSTIQYILVLLDDLLQEDRSRVDLFHDTAGKLKQCIWGP-FLN 125
             |:..:.....| |.|:|.......:.:.||.|.|.|......:..|            || |.:
pombe    69 TAEEDTTAYSNLFLKLLSMKDTPDVVNFALVKLADTLLNSNKFLSAF------------GPAFYD 121

  Fly   126 LLNRQDGFI--VNMSSRIL-AKFACWGHETMPKSDLNFYLQFLKDQLASNGLAYLQEMAQ-LAKR 186
            .|.:.:.:|  ::..|::| |:.......:.|.|....:..||:         ||.::.| |...
pombe   122 FLEKDESYINYLDDDSKLLFARVFALCSSSSPCSVAKAFTLFLE---------YLGKLMQSLNPL 177

  Fly   187 TQTILVHTHGKDKDHHGHQYSPTLAQLQQQHELAERANESYREVGVGSDHQQQDGKCVIPNNEYI 251
            |:...|                                                           
pombe   178 TRLFAV----------------------------------------------------------- 183

  Fly   252 QSVARCLQMMLRVDEYRFAFVGVDGIS-TLIRILSTRV-NFQVQYQLIFCLWVLTFNPLLAAKMN 314
                :||..:|.:..:|:|....:..| .|..:|...: :.|:||..:||.|.|||...:|..:|
pombe   184 ----QCLNGVLTLKAHRYALWAENTCSFRLAELLRNSIGDTQLQYYSLFCFWQLTFESHIAQDIN 244

  Fly   315 K-FSVIPILADILSDCAKEKVTRIILAVFRNLIEK-PED--SSVAKDHCIAMVQCKVLKQLSILE 375
            | |.:|.:|..|:....|.||.|::||:..|||:| |:|  |::..:|        |.|.:.:|:
pombe   245 KRFDLIKLLVQIIRSDTKTKVYRLVLAILVNLIDKAPKDTISTMLLEH--------VDKAVQLLQ 301

  Fly   376 QRRFDDEDITADVEYLSEKLQNSVQDLSSFDEYATEVRSGRLEWSPVHKSAKFWRENAQRLNEKN 440
            :|::.|||||..:::::..|..|.:.||:||.|.:|:.:|.|.|||.|:|..||.:||:||||.|
pombe   302 KRKWADEDITNYLDFITSTLDESSKHLSTFDMYKSELDTGILHWSPSHRSEDFWHQNAKRLNEDN 366

  Fly   441 YELLRILVHLLETSKDAIILSVACFDIGEYVRHYPRGKHVLEQLGGKQIVMQHLGHEDPNVRYEA 505
            |.||:.|.|:::.::|...|:|||.|:|.|:|.||.|:.::.:.|.||.:|..:.|.||.||:||
pombe   367 YALLKKLFHIVQYNEDNTSLAVACHDLGAYIRSYPEGRSLIIKYGAKQRIMDLMSHPDPEVRFEA 431

  Fly   506 LLAVQKLM 513
            |..||.||
pombe   432 LSTVQLLM 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaSFDNP_723992.1 VATPase_H 19..518 CDD:238159 143/510 (28%)
vma13NP_593848.1 VMA13 12..444 CDD:227556 145/524 (28%)
VATPase_H 22..444 CDD:238159 143/510 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 121 1.000 Domainoid score I1443
eggNOG 1 0.900 - - E1_COG5231
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 201 1.000 Inparanoid score I993
OMA 1 1.010 - - QHG54625
OrthoFinder 1 1.000 - - FOG0004292
OrthoInspector 1 1.000 - - oto102077
orthoMCL 1 0.900 - - OOG6_101800
Panther 1 1.100 - - LDO PTHR10698
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1635
SonicParanoid 1 1.000 - - X3548
TreeFam 1 0.960 - -
1312.860

Return to query results.
Submit another query.