DRSC/TRiP Functional Genomics Resources

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Protein Alignment VhaSFD and vha-15

DIOPT Version :9

Sequence 1:NP_723992.1 Gene:VhaSFD / 34997 FlyBaseID:FBgn0027779 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_508412.1 Gene:vha-15 / 180534 WormBaseID:WBGene00020507 Length:470 Species:Caenorhabditis elegans


Alignment Length:531 Identity:245/531 - (46%)
Similarity:325/531 - (61%) Gaps:83/531 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LPEENI---DMIAATSVLQQQAADIRTRTINWASYMQSQMISEEDYKAISALD-----KSRASFL 63
            :|..||   ||:.|||.||.:|.::|....||.||.:||||.|:||..|::.:     :.|...|
 Worm     4 VPHHNIPAVDMLNATSRLQLEAQELRNNKPNWGSYFRSQMIQEDDYNFITSFENAKSKEERDQVL 68

  Fly    64 AQNSS--QVVKTLLNLVSHLSKDSTIQYILVLLDDLLQEDRSRVDLFHDTAGKLKQCIWGPFLNL 126
            |.|::  |..||:.||::.::||..::|:|.|.||:||||:|||:|||..|.:.|:.:|..:|.:
 Worm    69 AANNANGQAAKTMANLITQVAKDQNVRYVLTLFDDMLQEDKSRVELFHSAAARQKRTVWSQYLGI 133

  Fly   127 LNRQDGFIVNMSSRILAKFACWGHETMPKSDLNFYLQFLKDQLASNGLAYLQEMAQLAKRTQTIL 191
            |.|||.||||..|.|:||.||:|...|...||.:|..|||:||               |.:.|  
 Worm   134 LQRQDNFIVNQMSSIIAKLACFGTTRMEGQDLQYYFSFLKEQL---------------KNSTT-- 181

  Fly   192 VHTHGKDKDHHGHQYSPTLAQLQQQHELAERANESYREVGVGSDHQQQDGKCVIPNNEYIQSVAR 256
                                                                    |:|:.:.||
 Worm   182 --------------------------------------------------------NDYMNTTAR 190

  Fly   257 CLQMMLRVDEYRFAFVGVDGISTLIRILSTRVNFQVQYQLIFCLWVLTFNPLLAAKMNKFSVIPI 321
            |||||||.||||..||..||:.||:..|:.:.|||:||||||.:|.||||..:|.|.....:|..
 Worm   191 CLQMMLRHDEYRHEFVDSDGVQTLVTALNGKTNFQLQYQLIFAVWCLTFNADIARKAPSLGLIQA 255

  Fly   322 LADILSDCAKEKVTRIILAVFRNLIEKPEDSSVAKDHCIAMVQCKVLKQLSILEQRRFDDEDITA 386
            |.||||:..||||.|||||.|.|::.|.::..|.::..:.|||||.||.|.:::.:::||.|:..
 Worm   256 LGDILSESTKEKVIRIILASFVNILSKVDEREVKREAALQMVQCKTLKTLELMDAKKYDDPDLED 320

  Fly   387 DVEYLSEKLQNSVQDLSSFDEYATEVRSGRLEWSPVHKSAKFWRENAQRLNEKNYELLRILVHLL 451
            ||::|:|:|..||.||||:|||.:|||||||:|||||||.|||||||.:.|:|.:|:::||:.||
 Worm   321 DVKFLTEELTLSVHDLSSYDEYYSEVRSGRLQWSPVHKSEKFWRENASKFNDKQFEVVKILIKLL 385

  Fly   452 ETSKDAIILSVACFDIGEYVRHYPRGKHVLEQLGGKQIVMQHLGHEDPNVRYEALLAVQKLMVHN 516
            |:|.|.:||.||..|||||||||||||.|:||..||..||:.|..|||||||.||||||||||||
 Worm   386 ESSHDPLILCVASHDIGEYVRHYPRGKTVVEQYQGKAAVMRLLTAEDPNVRYHALLAVQKLMVHN 450

  Fly   517 WEYLGKQLEKE 527
            ||||||||:.:
 Worm   451 WEYLGKQLDSD 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaSFDNP_723992.1 VATPase_H 19..518 CDD:238159 230/505 (46%)
vha-15NP_508412.1 VATPase_H 19..452 CDD:238159 230/505 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158279
Domainoid 1 1.000 290 1.000 Domainoid score I833
eggNOG 1 0.900 - - E1_COG5231
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7139
Inparanoid 1 1.050 487 1.000 Inparanoid score I786
Isobase 1 0.950 - 0 Normalized mean entropy S1675
OMA 1 1.010 - - QHG54625
OrthoDB 1 1.010 - - D352854at33208
OrthoFinder 1 1.000 - - FOG0004292
OrthoInspector 1 1.000 - - oto19439
orthoMCL 1 0.900 - - OOG6_101800
Panther 1 1.100 - - LDO PTHR10698
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1635
SonicParanoid 1 1.000 - - X3548
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1716.790

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