DRSC/TRiP Functional Genomics Resources

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Protein Alignment VhaSFD and Atp6v1h

DIOPT Version :9

Sequence 1:NP_723992.1 Gene:VhaSFD / 34997 FlyBaseID:FBgn0027779 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_598587.2 Gene:Atp6v1h / 108664 MGIID:1914864 Length:483 Species:Mus musculus


Alignment Length:530 Identity:262/530 - (49%)
Similarity:350/530 - (66%) Gaps:64/530 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IDMIAATSVLQQQAADIRTRTINWASYMQSQMISEEDYKAISALDKSRAS-----FLAQNSSQVV 71
            :|....|:::..:||::|...:||.||:|.||||.||.:.|...:..|:|     .|....||..
Mouse    10 VDAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSSEDKQEMLQTEGSQCA 74

  Fly    72 KTLLNLVSHLSKDSTIQYILVLLDDLLQEDRSRVDLFHDTAGKLKQCIWGPFLNLLNRQDGFIVN 136
            ||.:||::|:||:.|:||||.::||:|||:..||.:|.|.|.:.|...|..||.:|||||.|.|:
Mouse    75 KTFINLMTHISKEQTVQYILTMVDDMLQENHQRVSIFFDYAKRSKSTAWPYFLPMLNRQDPFTVH 139

  Fly   137 MSSRILAKFACWGHETMPKSDLNFYLQFLKDQLASNGLAYLQEMAQLAKRTQTILVHTHGKDKDH 201
            |::||:||.|.||.|.|..||||:|..::|.||:|..|    ..:.:|..|.||           
Mouse   140 MAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSSQKL----RGSGVAVETGTI----------- 189

  Fly   202 HGHQYSPTLAQLQQQHELAERANESYREVGVGSDHQQQDGKCVIPNNEYIQSVARCLQMMLRVDE 266
                                          ..||           :::|:|.||.|||:||||:|
Mouse   190 ------------------------------SSSD-----------SSQYVQCVAGCLQLMLRVNE 213

  Fly   267 YRFAFVGVDGISTLIRILSTRVNFQVQYQLIFCLWVLTFNPLLAAKMNKFSVIPILADILSDCAK 331
            ||||:|..||::.::.:||.:..||:|||:||.:|:|.|:|.:...:.::::||:|:|||.:..|
Mouse   214 YRFAWVEADGVNCIMGVLSNKCGFQLQYQMIFSIWLLAFSPQMCEHLRRYNIIPVLSDILQESVK 278

  Fly   332 EKVTRIILAVFRNLIEKPEDSSVAKDHCIAMVQCKVLKQLSILEQRRFDDEDITADVEYLSEKLQ 396
            |||||||||.|||.:||..:....:::.:||:||||||||..|||:::|||||:.|:::|.|||.
Mouse   279 EKVTRIILAAFRNFLEKSTERETRQEYALAMIQCKVLKQLENLEQQKYDDEDISEDIKFLLEKLG 343

  Fly   397 NSVQDLSSFDEYATEVRSGRLEWSPVHKSAKFWRENAQRLNEKNYELLRILVHLLETSKDAIILS 461
            .|||||||||||::|::||||||||||||.|||||||.||||||||||:||..|||.|.|..:|:
Mouse   344 ESVQDLSSFDEYSSELKSGRLEWSPVHKSEKFWRENAVRLNEKNYELLKILTKLLEVSDDPQVLA 408

  Fly   462 VACFDIGEYVRHYPRGKHVLEQLGGKQIVMQHLGHEDPNVRYEALLAVQKLMVHNWEYLGKQLEK 526
            ||..|:|||||||||||.|:|||||||:||.|:.|||..|||.||||||||||||||||||||:.
Mouse   409 VAAHDVGEYVRHYPRGKRVIEQLGGKQLVMNHMHHEDQQVRYNALLAVQKLMVHNWEYLGKQLQS 473

  Fly   527 ENENQKQGAA 536
            |   |.|.||
Mouse   474 E---QPQTAA 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaSFDNP_723992.1 VATPase_H 19..518 CDD:238159 247/503 (49%)
Atp6v1hNP_598587.2 VATPase_H 17..465 CDD:238159 247/503 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834596
Domainoid 1 1.000 307 1.000 Domainoid score I1343
eggNOG 1 0.900 - - E1_COG5231
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7139
Inparanoid 1 1.050 522 1.000 Inparanoid score I1249
Isobase 1 0.950 - 0 Normalized mean entropy S1675
OMA 1 1.010 - - QHG54625
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004292
OrthoInspector 1 1.000 - - oto95217
orthoMCL 1 0.900 - - OOG6_101800
Panther 1 1.100 - - LDO PTHR10698
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1635
SonicParanoid 1 1.000 - - X3548
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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