DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyt-c-d and cyc-2.2

DIOPT Version :9

Sequence 1:NP_001260509.1 Gene:Cyt-c-d / 34995 FlyBaseID:FBgn0086907 Length:105 Species:Drosophila melanogaster
Sequence 2:NP_506156.1 Gene:cyc-2.2 / 179728 WormBaseID:WBGene00013854 Length:123 Species:Caenorhabditis elegans


Alignment Length:99 Identity:60/99 - (60%)
Similarity:70/99 - (70%) Gaps:1/99 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GDAENGKKIFVQKCAQCHTYEVGGKHKVGPNLGGVVGRKCGTAAGYKYTDANIKKGVTWTEGNLD 68
            ||.|.|||||.|:|.|||... ..:.|.||.|.||:||:.|..||:.|:.||..|||.|....|.
 Worm    17 GDNEKGKKIFKQRCEQCHVVN-SLQTKTGPTLNGVIGRQSGQVAGFDYSAANKNKGVVWDRQTLF 80

  Fly    69 EYLKDPKKYIPGTKMVFAGLKKAEERADLIAFLK 102
            :||.|||||||||||||||||||:||||||.|::
 Worm    81 DYLADPKKYIPGTKMVFAGLKKADERADLIKFIE 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyt-c-dNP_001260509.1 Cyc7 <4..103 CDD:226005 60/99 (61%)
cyc-2.2NP_506156.1 Cyc7 16..120 CDD:226005 60/99 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 132 1.000 Domainoid score I3179
eggNOG 1 0.900 - - E1_COG3474
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 142 1.000 Inparanoid score I3056
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54087
OrthoDB 1 1.010 - - D1533604at2759
OrthoFinder 1 1.000 - - FOG0001342
OrthoInspector 1 1.000 - - mtm4810
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X832
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.840

Return to query results.
Submit another query.