DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment grp and PRR2

DIOPT Version :9

Sequence 1:NP_477011.1 Gene:grp / 34993 FlyBaseID:FBgn0261278 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_010067.1 Gene:PRR2 / 851312 SGDID:S000002373 Length:699 Species:Saccharomyces cerevisiae


Alignment Length:400 Identity:91/400 - (22%)
Similarity:158/400 - (39%) Gaps:101/400 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAATLTEAGTGPAATREF---------------------VEGWT---------LAQTLGEGAYGE 35
            ::::|.|..:.|.:|..|                     :|..|         |...||||:.|:
Yeast   310 ISSSLKETTSSPVSTGSFSLMIENEDSDRDQIIQALYSNIEASTDLVSRKYRDLDVVLGEGSGGK 374

  Fly    36 VKLLINRQTGEAVAMKMVDLKKHPDA----ANSVRKEVCIQKMLQDKHILRFF------GKRSQG 90
            |||:......:..|:|....||..::    ..::..|.||...|::.:|....      ||..| 
Yeast   375 VKLVQRVLDNKVFALKEYRSKKKRESERKYIKNIISEYCIASTLKNPNICETLEILYEKGKIFQ- 438

  Fly    91 SVEYIFLEYAAGGELFDRIEPDVGMPQHEAQRYFTQLLSGLNYLHQRGIAHRDLKPENLLLDEHD 155
            .:||  .||    :||..:..: .|...|....|.||::|:.|||..|::|||||.:|.::....
Yeast   439 ILEY--CEY----DLFSLVMSE-KMHYEEICCLFKQLINGVKYLHDIGLSHRDLKLDNCVVTRRG 496

  Fly   156 NVKISDFGMATMFRCKGKERLLDKR--CGTLPYVAPEVLQ-KAYHAQPADLWSCGVILVTMLAGE 217
            .:|:.|||.:::|......::::..  .|:.||::|||.. ..|..:..|:||.|:|...|:...
Yeast   497 ILKLIDFGASSVFHYPLSSQMIEANGIVGSDPYLSPEVFYFNEYDPRALDVWSVGIIFFCMITRR 561

  Fly   218 LPWDQPSTNCTEF-----------------------TNWRDNDHWQ-----------LQTPWSKL 248
            .||..|.....:|                       :|..|||.::           |.    :|
Yeast   562 FPWKYPKVKDVQFKAFCSGRGVSSFKDLVTRPATDDSNNYDNDGYEEGVIDMGPNFILH----RL 622

  Fly   249 DTLAISLLRKLLATSPGTRLTLEKTLDHKWCNMQFADNERSYDLVDSAAALEICSP-KAKRQRLQ 312
            ......::|::|..||..|:|:...|...|...           :::...:...|| :|..:.:.
Yeast   623 PEETHKIMRRILEVSPFRRITINGILQDGWIKE-----------IETCQVVGAASPNEASLRIIN 676

  Fly   313 SSAHLSNGLD 322
            ...|:...:|
Yeast   677 KGNHIHTNID 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grpNP_477011.1 STKc_Chk1 20..279 CDD:270971 80/314 (25%)
S_TKc 22..278 CDD:214567 79/311 (25%)
PRR2NP_010067.1 PKc_like 367..653 CDD:419665 77/297 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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