DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment grp and CIPK17

DIOPT Version :9

Sequence 1:NP_477011.1 Gene:grp / 34993 FlyBaseID:FBgn0261278 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_175260.1 Gene:CIPK17 / 841246 AraportID:AT1G48260 Length:432 Species:Arabidopsis thaliana


Alignment Length:484 Identity:122/484 - (25%)
Similarity:217/484 - (44%) Gaps:87/484 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 WTLAQTLGEGAYGEVKLLINRQTGEAVAMKMVDLK--KHPDAANSVRKEVCIQKMLQDKHILRFF 84
            :.|.:|||||...:||..|:..|||:.|:|:::..  ...:.:..:::|:...|:|:..:|:|..
plant    11 YELGRTLGEGNSAKVKFAIDTLTGESFAIKIIEKSCITRLNVSFQIKREIRTLKVLKHPNIVRLH 75

  Fly    85 GKRSQGSVEYIFLEYAAGGELFDRIEPDVGMPQHEAQRYFTQLLSGLNYLHQRGIAHRDLKPENL 149
            ...:..:..|:.||...||:|||||.....:.:.:.::.|.||:.|::|.|.:|:.|||||.||:
plant    76 EVLASKTKIYMVLECVTGGDLFDRIVSKGKLSETQGRKMFQQLIDGVSYCHNKGVFHRDLKLENV 140

  Fly   150 LLDEHDNVKISDFGMATMFRCKGKERLLDKRCGTLPYVAPEVL-QKAYHAQPADLWSCGVILVTM 213
            |||...::||:|||::.:.:...::.||...||:..||||||| .:.|....:|:|||||||..:
plant   141 LLDAKGHIKITDFGLSALSQHYREDGLLHTTCGSPNYVAPEVLANEGYDGAASDIWSCGVILYVI 205

  Fly   214 LAGELPWDQP--STNCTEFTNWRDNDHWQLQTP---WSKLDTLAISLLRKLLATSPGTRLTLEKT 273
            |.|.||:|..  :..|.:.        ::...|   |..|.  |.::::::|..:|.||:|:...
plant   206 LTGCLPFDDANLAVICRKI--------FKGDPPIPRWISLG--AKTMIKRMLDPNPVTRVTIAGI 260

  Fly   274 LDHKWCNMQFADNERSYDLVDSAAALEICSPKAKRQRLQSSAHLSNGLDDSISRNYCSQPMPTMR 338
            ..|.|....:..:  :||  |                           ||.:   |..|      
plant   261 KAHDWFKHDYTPS--NYD--D---------------------------DDDV---YLIQ------ 285

  Fly   339 SDDDFNVRLGSGRSKEDGGDRQTLAQEARLSYSFSQPALLDDLLLATQMNQTQNASQNYF--QRL 401
             :|.|.::   ...:|...|..|:....:|   ....:.||              ...:|  ::|
plant   286 -EDVFMMK---EYEEEKSPDSPTIINAFQL---IGMSSFLD--------------LSGFFETEKL 329

  Fly   402 VRRMTRFFVTTRWDDTIKRLVGTIERLGGYTC---KFGDDGVVTVSTVDRNKLRLVFKAHIIEMD 463
            ..|..||...:...|.::.:......:|  .|   |......:...:..:.:..|...|.:.|:.
plant   330 SERQIRFTSNSLAKDLLENIETIFTEMG--FCLQKKHAKLKAIKEESTQKRQCGLSVTAEVFEIS 392

  Fly   464 GKI-LVDCRLSKGCGLEFKRRFIKIKNAL 491
            ..: :|:.|.|.|....:|:.:.::.|.|
plant   393 PSLNVVELRKSHGDSSLYKQLYERLLNEL 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grpNP_477011.1 STKc_Chk1 20..279 CDD:270971 87/264 (33%)
S_TKc 22..278 CDD:214567 87/263 (33%)
CIPK17NP_175260.1 PKc_like 10..265 CDD:304357 87/263 (33%)
S_TKc 11..266 CDD:214567 87/264 (33%)
CIPK_C 307..418 CDD:213380 20/129 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 209 1.000 Inparanoid score I1258
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

Return to query results.
Submit another query.