DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment grp and SIP1

DIOPT Version :9

Sequence 1:NP_477011.1 Gene:grp / 34993 FlyBaseID:FBgn0261278 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_568878.1 Gene:SIP1 / 835951 AraportID:AT5G58380 Length:479 Species:Arabidopsis thaliana


Alignment Length:518 Identity:136/518 - (26%)
Similarity:229/518 - (44%) Gaps:129/518 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 WTLAQTLGEGAYGEVKLLINRQTGEAVAMKMVDLKK--HPDAANSVRKEVCIQKMLQDKHILRFF 84
            :.:.:.||:|.:.:|....:..|.::||:||:|.:|  .......:::|:.:.::.:..:::..:
plant    12 YDVGRLLGQGTFAKVYYGRSILTNQSVAIKMIDKEKVMKVGLIEQIKREISVMRIARHPNVVELY 76

  Fly    85 GKRSQGSVEYIFLEYAAGGELFDRI-----EPDVGMPQHEAQRYFTQLLSGLNYLHQRGIAHRDL 144
            ...:..:..|..:||..|||||:::     ..||      |.:||.||::.:::.|.|.:.|||:
plant    77 EVMATKTRIYFVMEYCKGGELFNKVAKGKLRDDV------AWKYFYQLINAVDFCHSREVYHRDI 135

  Fly   145 KPENLLLDEHDNVKISDFGMATMFRCKGKERLLDKRCGTLPYVAPEVL-QKAYHAQPADLWSCGV 208
            ||||||||:::|:|:||||::.:..||.::.||...|||..||||||: :|.|....||:|||||
plant   136 KPENLLLDDNENLKVSDFGLSALADCKRQDGLLHTTCGTPAYVAPEVINRKGYDGTKADIWSCGV 200

  Fly   209 ILVTMLAGELPWDQPSTNCTEFTNWRDNDHWQLQTPWSKLDTLAIS--------LLRKLLATSPG 265
            :|..:|||.||             :.|::..::.....|.|..|.|        ||.|:|..:|.
plant   201 VLFVLLAGYLP-------------FHDSNLMEMYRKIGKADFKAPSWFAPEVRRLLCKMLDPNPE 252

  Fly   266 TRLTLEKTLDHKW----CNMQFADNERSYDLVDSAAALEICSPKAKRQRLQSSAHLSNGLDDSIS 326
            ||:|:.:..:..|    .:|:....|:....::|..|             .::....||...|.:
plant   253 TRITIARIRESSWFRKGLHMKQKKMEKRVKEINSVEA-------------GTAGTNENGAGPSEN 304

  Fly   327 RNYCSQPMPTMRSDDDFNVRLGSGRSKEDGGDRQTLAQEA------------RLSYSFSQPALLD 379
                                 |:|.|  :.|||.|.....            .||..|....|..
plant   305 ---------------------GAGPS--ENGDRVTEENHTDEPTNLNAFDLIALSAGFDLAGLFG 346

  Fly   380 DLLLATQMNQTQNASQNYFQRLVRRMTRFFVTTRWDDTI-KRLVG--TIERLGGYTCKFGDDGVV 441
            |    ....:::..||.....::.::..  |..|...:| ||..|  .:|||     |.|..|  
plant   347 D----DNKRESRFTSQKPASVIISKLEE--VAQRLKLSIRKREAGLFKLERL-----KEGRKG-- 398

  Fly   442 TVSTVDRNKLRLVFKAHIIEMDGKI--------LVDCRLSKGCGLEFKRRFIK-IKNALEDIV 495
                             |:.||.:|        ||:.:.|.|..||:::...: ::.||.|||
plant   399 -----------------ILSMDAEIFQVTPNFHLVEVKKSNGDTLEYQKLVAEDLRPALSDIV 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grpNP_477011.1 STKc_Chk1 20..279 CDD:270971 88/276 (32%)
S_TKc 22..278 CDD:214567 87/271 (32%)
SIP1NP_568878.1 PKc_like 11..265 CDD:419665 87/271 (32%)
CIPK_C 328..440 CDD:213380 29/141 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 209 1.000 Inparanoid score I1258
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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