DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment grp and SOS2

DIOPT Version :9

Sequence 1:NP_477011.1 Gene:grp / 34993 FlyBaseID:FBgn0261278 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_198391.1 Gene:SOS2 / 833502 AraportID:AT5G35410 Length:446 Species:Arabidopsis thaliana


Alignment Length:511 Identity:143/511 - (27%)
Similarity:235/511 - (45%) Gaps:105/511 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 WTLAQTLGEGAYGEVKLLINRQTGEAVAMKMVD----LKKHPDAANSVRKEVCIQKMLQDKHILR 82
            :.:.:|:|||.:.:||...|..||:.||:|::.    ||..  ..:.:::|:.|.|:::..:|:|
plant    11 YEVGRTIGEGTFAKVKFARNTDTGDNVAIKIMAKSTILKNR--MVDQIKREISIMKIVRHPNIVR 73

  Fly    83 FFGKRSQGSVEYIFLEYAAGGELFDRIEPDVGMPQHEAQRYFTQLLSGLNYLHQRGIAHRDLKPE 147
            .:...:..|..||.||:..||||||||.....:.:.|:::||.||:..:.:.|.:|:.|||||||
plant    74 LYEVLASPSKIYIVLEFVTGGELFDRIVHKGRLEESESRKYFQQLVDAVAHCHCKGVYHRDLKPE 138

  Fly   148 NLLLDEHDNVKISDFGMATMFRCKGKERLLDKRCGTLPYVAPEVLQ-KAYHAQPADLWSCGVILV 211
            |||||.:.|:|:||||::.:.: :|.| ||...|||..|||||||. :.|....||:|||||||.
plant   139 NLLLDTNGNLKVSDFGLSALPQ-EGVE-LLRTTCGTPNYVAPEVLSGQGYDGSAADIWSCGVILF 201

  Fly   212 TMLAGELPW---DQP----STNCTEFTNWRDNDHWQLQTPWSKLDTLAISLLRKLLATSPGTRLT 269
            .:|||.||:   |.|    ..|..||:          ..||...:..  .|:.::|..:|.||:.
plant   202 VILAGYLPFSETDLPGLYRKINAAEFS----------CPPWFSAEVK--FLIHRILDPNPKTRIQ 254

  Fly   270 LEKTLDHKWCNMQF----ADNERSYDLVDSAAALEICSPKAKRQRLQSSAHLSNGLDDSISRNYC 330
            ::......|..:.:    |..|...:|.|..|..                       |.|..:|.
plant   255 IQGIKKDPWFRLNYVPIRAREEEEVNLDDIRAVF-----------------------DGIEGSYV 296

  Fly   331 SQPMPTMRSDDDFNVRLGSGRSKEDGGDRQTLAQEARLSYSFSQPALLDDLLLATQMNQTQNASQ 395
            ::.:.  |:|:        |....:..:..||:|...||..|.:.                    
plant   297 AENVE--RNDE--------GPLMMNAFEMITLSQGLNLSALFDRR-------------------- 331

  Fly   396 NYFQRLVRRMTRFFVTTRWDDTIKRLVGTIERLG--GYTCKFGD--DGVVTVSTVDRNKLRLVFK 456
               |..|:|.|||.......:.|..:......:|  .:|..|..  :|   :|::...:|.:|.:
plant   332 ---QDFVKRQTRFVSRREPSEIIANIEAVANSMGFKSHTRNFKTRLEG---LSSIKAGQLAVVIE 390

  Fly   457 AHIIEMDGKILVDCRLSKGCGLEFKRRFIKIKNALEDIVLKGPTTWPIAIATNSVP 512
            .:.: .....:||.|.:.|..||:.:.:.|:.:.||:|:.:         ||..:|
plant   391 IYEV-APSLFMVDVRKAAGETLEYHKFYKKLCSKLENIIWR---------ATEGIP 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grpNP_477011.1 STKc_Chk1 20..279 CDD:270971 98/268 (37%)
S_TKc 22..278 CDD:214567 98/267 (37%)
SOS2NP_198391.1 PKc_like 10..263 CDD:419665 98/267 (37%)
CIPK_C 311..426 CDD:213380 28/141 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 209 1.000 Inparanoid score I1258
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001125
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.960

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