DRSC/TRiP Functional Genomics Resources

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Protein Alignment grp and SNRK2.1

DIOPT Version :9

Sequence 1:NP_477011.1 Gene:grp / 34993 FlyBaseID:FBgn0261278 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_196476.1 Gene:SNRK2.1 / 830760 AraportID:AT5G08590 Length:353 Species:Arabidopsis thaliana


Alignment Length:365 Identity:114/365 - (31%)
Similarity:180/365 - (49%) Gaps:54/365 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 VEGWTLAQTLGEGAYGEVKLLINRQTGEAVAMKMVDLKKHPDAANSVRKEVCIQKMLQDKHILRF 83
            ::.:.:.:.||.|.:|..:||.::.|.|.||||.::..:..|  .:|.:|:...:.|:..:|:||
plant     1 MDKYDVVKDLGAGNFGVARLLRHKDTKELVAMKYIERGRKID--ENVAREIINHRSLKHPNIIRF 63

  Fly    84 FGKRSQGSVEYIFLEYAAGGELFDRIEPDVGMPQHEAQRYFTQLLSGLNYLHQRGIAHRDLKPEN 148
            .......:...|.:|||:||||||||.......:.||:.:|.||:.|::|.|...|.|||||.||
plant    64 KEVILTPTHLAIVMEYASGGELFDRICTAGRFSEAEARYFFQQLICGVDYCHSLQICHRDLKLEN 128

  Fly   149 LLLDEHDN--VKISDFGMATMFRCKGKERLLDKR----CGTLPYVAPEVL-QKAYHAQPADLWSC 206
            .|||....  :||.|||.:       |..:|..|    .||..|:||||| ::.|..:.||:|||
plant   129 TLLDGSPAPLLKICDFGYS-------KSSILHSRPKSTVGTPAYIAPEVLSRREYDGKHADVWSC 186

  Fly   207 GVILVTMLAGELPWDQPSTNCTEFTNWRDNDHWQLQTPWSKLDTLAIS-----LLRKLLATSPGT 266
            ||.|..||.|..|::.|:    :..|:|......:...:...|.:.||     ||.::..|:...
plant   187 GVTLYVMLVGAYPFEDPN----DPKNFRKTIQRIMAVQYKIPDYVHISQECKHLLSRIFVTNSAK 247

  Fly   267 RLTLEKTLDHKWCNMQFADNERSYDLVDSAAALEICSPKAKRQ---RLQSSAHLSNGLDDSISRN 328
            |:||::..:|.|    :..| ...:|::||.|...     ||.   .|||...:...:.:  :||
plant   248 RITLKEIKNHPW----YLKN-LPKELLESAQAAYY-----KRDTSFSLQSVEDIMKIVGE--ARN 300

  Fly   329 YCSQPMPT---MRSDDDFNVRLGSGRSKEDGGDRQTLAQE 365
                |.|:   ::|.       |||..:|:..|.:...:|
plant   301 ----PAPSTSAVKSS-------GSGADEEEEEDVEAEVEE 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grpNP_477011.1 STKc_Chk1 20..279 CDD:270971 92/270 (34%)
S_TKc 22..278 CDD:214567 92/267 (34%)
SNRK2.1NP_196476.1 STKc_SnRK2 3..259 CDD:271132 92/268 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24343
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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