DRSC/TRiP Functional Genomics Resources

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Protein Alignment grp and CIPK2

DIOPT Version :9

Sequence 1:NP_477011.1 Gene:grp / 34993 FlyBaseID:FBgn0261278 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_196324.1 Gene:CIPK2 / 830598 AraportID:AT5G07070 Length:456 Species:Arabidopsis thaliana


Alignment Length:499 Identity:132/499 - (26%)
Similarity:227/499 - (45%) Gaps:99/499 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 EGWTLAQTLGEGAYGEVKLLINRQTGEAVAMKMVDLKK--HPDAANSVRKEVCIQKMLQDKHILR 82
            |.:.:.:.||:|.:.:|....:..|.|:||:||:|..|  ....:..:::|:.:.::.:..:::.
plant    10 ERYEVGRLLGQGTFAKVYFGRSNHTNESVAIKMIDKDKVMRVGLSQQIKREISVMRIAKHPNVVE 74

  Fly    83 FFGKRSQGSVEYIFLEYAAGGELFDRI-----EPDVGMPQHEAQRYFTQLLSGLNYLHQRGIAHR 142
            .:...:..|..|..:||..|||||:::     :.||      |.:||.||:|.:::.|.||:.||
plant    75 LYEVMATKSRIYFVIEYCKGGELFNKVAKGKLKEDV------AWKYFYQLISAVDFCHSRGVYHR 133

  Fly   143 DLKPENLLLDEHDNVKISDFGMATMFRCKGKERLLDKRCGTLPYVAPEVL-QKAYHAQPADLWSC 206
            |:||||||||::||:|:||||::.:..||.::.||...|||..||||||: :|.|....||:|||
plant   134 DIKPENLLLDDNDNLKVSDFGLSALADCKRQDGLLHTTCGTPAYVAPEVINRKGYEGTKADIWSC 198

  Fly   207 GVILVTMLAGELPWDQPSTNCTEFTNWRDNDHWQLQTP-WSKLDTLAISLLRKLLATSPGTRLTL 270
            ||:|..:|||.||:.  .||..|.  :|.......:.| |...:..  .||.|:|..:..||:|:
plant   199 GVVLFVLLAGYLPFH--DTNLMEM--YRKIGKADFKCPSWFAPEVK--RLLCKMLDPNHETRITI 257

  Fly   271 EKTLDHKWCNMQFADNERSYDLVDSAAALEICSPKAKRQRLQSSAHLSNGLDDSISRNYCSQPMP 335
            .|..:..|........::..:.::.....|..:|    .....|....||      .|:  :| |
plant   258 AKIKESSWFRKGLHLKQKKMEKMEKQQVREATNP----MEAGGSGQNENG------ENH--EP-P 309

  Fly   336 TMRSDDDFNVRLGSGRSKEDGGDRQTLAQEARLSYSFSQPALLDDLLLATQMNQTQNASQNYFQR 400
            .:.:.:.|::                    ..||..|....|..|:.   ...:::.|||.....
plant   310 RLATLNAFDI--------------------IALSTGFGLAGLFGDVY---DKRESRFASQKPASE 351

  Fly   401 LVRRMTRFFVTTRWDDTIKRLVGTIERLGGYTCKF-----GDDGVVTVSTVDRNKLRLVFKAHII 460
            ::.::.         :..|.|...|.:.|....|.     |.:|::|                  
plant   352 IISKLV---------EVAKCLKLKIRKQGAGLFKLERVKEGKNGILT------------------ 389

  Fly   461 EMDGKI--------LVDCRLSKGCGLEFKRRFIK-IKNALEDIV 495
             ||.:|        ||:.:...|..:|:::...: ::.||.|||
plant   390 -MDAEIFQVTPTFHLVEVKKCNGDTMEYQKLVEEDLRPALADIV 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grpNP_477011.1 STKc_Chk1 20..279 CDD:270971 94/267 (35%)
S_TKc 22..278 CDD:214567 93/264 (35%)
CIPK2NP_196324.1 PKc_like 11..265 CDD:419665 93/265 (35%)
CIPK_C 315..428 CDD:213380 24/163 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 209 1.000 Inparanoid score I1258
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.960

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