DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment grp and CIPK4

DIOPT Version :10

Sequence 1:NP_477011.1 Gene:grp / 34993 FlyBaseID:FBgn0261278 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_193194.1 Gene:CIPK4 / 827106 AraportID:AT4G14580 Length:426 Species:Arabidopsis thaliana


Alignment Length:358 Identity:111/358 - (31%)
Similarity:177/358 - (49%) Gaps:51/358 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 WTLAQTLGEGAYGEVKLLINRQTGEAVAMKMVDLKKHPDAA---NSVRKEVCIQKMLQDKHILRF 83
            :.|.:.||.|::.:|.:..:..|||.||:|::|.:|..|:.   ..:|:...::::....::|:.
plant    21 YELGRRLGSGSFAKVHVARSISTGELVAIKIIDKQKTIDSGMEPRIIREIEAMRRLHNHPNVLKI 85

  Fly    84 FGKRSQGSVEYIFLEYAAGGELFDRIEPDVGMPQHEAQRYFTQLLSGLNYLHQRGIAHRDLKPEN 148
            ....:..|..|:.:|||||||||.::.....:.:..|:|||.||.|.|::.|:.||||||:||:|
plant    86 HEVMATKSKIYLVVEYAAGGELFTKLIRFGRLNESAARRYFQQLASALSFCHRDGIAHRDVKPQN 150

  Fly   149 LLLDEHDNVKISDFGMATMFRCKGKERLLDKRCGTLPYVAPEVL-QKAYHAQPADLWSCGVILVT 212
            ||||:..|:|:||||::.:...:....||...|||..|.||||: |:.|....||.|||||.|..
plant   151 LLLDKQGNLKVSDFGLSALPEHRSNNGLLHTACGTPAYTAPEVIAQRGYDGAKADAWSCGVFLFV 215

  Fly   213 MLAGELPWDQPSTNCT---------EFTNWRDNDHWQLQTPWSKLDTLAISLLRKLLATSPGTRL 268
            :|||.:|:|..:....         .|.:|       :..|       |.|::.|||..:|.||:
plant   216 LLAGYVPFDDANIVAMYRKIHKRDYRFPSW-------ISKP-------ARSIIYKLLDPNPETRM 266

  Fly   269 TLEKTLDHKWCNMQFADNERSYDLVDSAAALEICSPKAKRQRLQSSA-------HLSNGLDDS-- 324
            ::|..:...|.......:|....:.:....||       ::...|:|       .||:|||.|  
plant   267 SIEAVMGTVWFQKSLEISEFQSSVFELDRFLE-------KEAKSSNAITAFDLISLSSGLDLSGL 324

  Fly   325 ISRNYCSQPMPTMRSDDDFNVRLGSGRSKEDGG 357
            ..|.        .|.:..|..|:.:.|..|..|
plant   325 FERR--------KRKEKRFTARVSAERVVEKAG 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grpNP_477011.1 STKc_Chk1 20..279 CDD:270971 92/269 (34%)
CIPK4NP_193194.1 Protein Kinases, catalytic domain 20..276 CDD:473864 92/268 (34%)
CIPK_C 308..>376 CDD:213380 13/50 (26%)

Return to query results.
Submit another query.