DRSC/TRiP Functional Genomics Resources

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Protein Alignment grp and Prkaa1

DIOPT Version :10

Sequence 1:NP_477011.1 Gene:grp / 34993 FlyBaseID:FBgn0261278 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_062015.2 Gene:Prkaa1 / 65248 RGDID:3387 Length:559 Species:Rattus norvegicus


Alignment Length:301 Identity:102/301 - (33%)
Similarity:157/301 - (52%) Gaps:39/301 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 WTLAQTLGEGAYGEVKLLINRQTGEAVAMKMVDLKK--HPDAANSVRKEVCIQKMLQDKHILRFF 84
            :.|..|||.|.:|:||:..:..||..||:|:::.:|  ..|....:|:|:...|:.:..||::.:
  Rat    27 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLY 91

  Fly    85 GKRSQGSVEYIFLEYAAGGELFDRIEPDVGMPQHEAQRYFTQLLSGLNYLHQRGIAHRDLKPENL 149
            ...|..|..::.:||.:||||||.|..:..:.:.|::|.|.|:|||::|.|:..:.||||||||:
  Rat    92 QVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENV 156

  Fly   150 LLDEHDNVKISDFGMATMFRCKGKERLLDKRCGTLPYVAPEVLQKAYHAQP-ADLWSCGVILVTM 213
            |||.|.|.||:|||::.|.   .....|...||:..|.||||:....:|.| .|:||.||||..:
  Rat   157 LLDAHMNAKIADFGLSNMM---SDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYAL 218

  Fly   214 LAGELPWDQPSTNCTEFTNWRDNDHWQLQTPWSK-----------LDTLAISLLRKLLATSPGTR 267
            |.|.||:              |:||  :.|.:.|           |:...||||:.:|...|..|
  Rat   219 LCGTLPF--------------DDDH--VPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKR 267

  Fly   268 LTLEKTLDHKWCNMQF------ADNERSYDLVDSAAALEIC 302
            .|::...:|:|.....      .|...|..::|..|..|:|
  Rat   268 ATIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEVC 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grpNP_477011.1 STKc_Chk1 20..279 CDD:270971 95/270 (35%)
Prkaa1NP_062015.2 STKc_AMPK_alpha 24..279 CDD:270981 95/270 (35%)
UBA_AID_AAPK1 296..360 CDD:270586 4/13 (31%)
AIS. /evidence=ECO:0000250|UniProtKB:Q13131 302..381 3/7 (43%)
AMPKA1_C 404..557 CDD:213384
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 484..536
Blue background indicates that the domain is not in the aligned region.

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