DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment grp and CG17698

DIOPT Version :9

Sequence 1:NP_477011.1 Gene:grp / 34993 FlyBaseID:FBgn0261278 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001036633.2 Gene:CG17698 / 4379919 FlyBaseID:FBgn0040056 Length:694 Species:Drosophila melanogaster


Alignment Length:463 Identity:106/463 - (22%)
Similarity:172/463 - (37%) Gaps:153/463 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 WTLAQTLGEGAYGEVKLLINRQTGEAVAMKMVD----------LKKHPDAANS----VRKEVCIQ 72
            :.|.:.:|:|:||.|||..:.:.....|||::.          :::.|..|.|    |.:|:.:.
  Fly   283 YRLMEQIGQGSYGLVKLAYSEEDSTHYAMKILSKKRLLRQAGLMRRGPRKATSPLDRVYREIAVL 347

  Fly    73 KMLQDKHILRFFGKRSQGSVE----------YIFLEYAAGGELFDRIEPDVGMPQHEAQRYFTQL 127
            |.|...::::.        ||          |:..|....||:. ||..|..:.:..|...|.:.
  Fly   348 KKLDHPNVVKL--------VEVLDDPLEDSLYMVFELVKQGEVL-RIPTDNPLSEKRAWSIFRES 403

  Fly   128 LSGLNY------------------LHQRGIAHRDLKPENLLLDEHDNVKISDFGMATMFRCKGKE 174
            |.||.|                  :|.:.|.|.|:||.||||.|..:|||:|.|:...|  .|.:
  Fly   404 LLGLEYYTMLSSSAISLKRIFVYTVHHQKIIHADIKPGNLLLTEFGHVKIADLGVCNEF--LGDD 466

  Fly   175 RLLD--KRCGTLPYVAPEVL---QKAYHAQPADLWSCGVILVTMLAGELPW------------DQ 222
            ..:.  ...||..:.|||.|   |..|..:.||:|:.|..|.:::.|.:|:            .|
  Fly   467 ATISNGSTAGTPAFRAPETLIPGQNEYCGRAADVWALGATLYSLIFGNVPFLADSVPLLYEKIKQ 531

  Fly   223 PSTNCTEFTNWRDNDHWQLQTPWSKLDTLAISLLRKLLATSPGTRLTLEKTLDHKW--------- 278
            .|....|.....:|           |.:..:.:|.|    :|..|:|:.:....||         
  Fly   532 DSVKFPENHKVTEN-----------LKSCIVQMLEK----NPTQRITIPQLKTSKWVTSDGDYPL 581

  Fly   279 -------CNMQFADNE-----RSYDLVDSAAALEIC-------SPKAKRQRLQSSAHLSNGLDDS 324
                   |.:|..|.:     ||...:|:...::..       :|..|.         .:|...|
  Fly   582 PTEEENCCLVQVDDEDIDSVVRSIPKLDTLILIKTMLKKHSFGNPFVKG---------CSGTSSS 637

  Fly   325 ISRNYCSQPMPTMRSDDDFNVRLGSGRSKEDGGDRQTLAQEARLSYSFS---QPA---LLDDLL- 382
            ::.  ||:....:|          :|||....|           ||..|   ||:   ||..|: 
  Fly   638 LAG--CSRIERFIR----------AGRSNSAPG-----------SYHMSTARQPSSDTLLPSLME 679

  Fly   383 -LATQMNQ 389
             .:||.|:
  Fly   680 HCSTQCNE 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grpNP_477011.1 STKc_Chk1 20..279 CDD:270971 78/331 (24%)
S_TKc 22..278 CDD:214567 76/314 (24%)
CG17698NP_001036633.2 S_TKc 283..573 CDD:214567 77/315 (24%)
STKc_CAMKK 288..574 CDD:271020 77/311 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24343
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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