DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment grp and CG4629

DIOPT Version :9

Sequence 1:NP_477011.1 Gene:grp / 34993 FlyBaseID:FBgn0261278 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_608564.3 Gene:CG4629 / 33284 FlyBaseID:FBgn0031299 Length:570 Species:Drosophila melanogaster


Alignment Length:495 Identity:121/495 - (24%)
Similarity:215/495 - (43%) Gaps:94/495 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LGEGAYGEVKLLINRQTGEAVAMKMVDLKKHPDAANSVR---KEVCIQKMLQDKHILRFFG-KRS 88
            :|.|.:.:|||.:::.|.:.||:|:|||.:....|.::|   .|:...:.:...:|||.|. ..:
  Fly    72 IGRGNFSKVKLAVHQLTRDKVAIKVVDLDRAGLDAKALRMLSSEIATLECVHHPNILRLFEVVET 136

  Fly    89 QGSVEYIFLEYAAGGELFDRIEPDVGMPQHEAQRYFTQLLSGLNYLHQRGIAHRDLKPENLLLDE 153
            .|.| |:..|:..||||::.|.....:.:..|.....|||..:.::|..|..|||:|.||:||..
  Fly   137 LGRV-YLVTEWIRGGELYNHITQGGPLREIHAAPLLKQLLLAVKHMHSLGYVHRDIKAENVLLLS 200

  Fly   154 HDNVKISDFGMATMFRCKGKERLLDKRCGTLPYVAPEVL-QKAYHAQPADLWSCGVILVTMLAGE 217
            .|.:|::|||.:|.. ..|..:.||..||:.||.|||:. ...|...|.|:|:.|::|..|:.|.
  Fly   201 EDRLKLADFGFSTQL-INGANQKLDTFCGSPPYAAPELFSDDHYIGAPVDVWALGILLYFMVVGN 264

  Fly   218 LPWDQPSTNCTEFTNWRDNDH---WQLQTPWSKLDTLAISLLRKLLATSPGTRLTLEKTLDHKWC 279
            :|:..|:....:....: .|:   .||..|       .|.|::::|...|..|.|::..|:.::.
  Fly   265 MPFRAPTIPGLKAAILK-GDYLLPGQLSLP-------CIRLIQRILIHIPAQRPTIDDMLNSQFV 321

  Fly   280 N--------MQFADNERSYDLVDSAAALEICSPKAKRQRLQSSAHLSNGLDDSISRNYCSQPMPT 336
            .        ||:..|:.:..:..|     |...::|..||:.||.|.:...:.:.:...|  |.|
  Fly   322 TCPKLSADLMQWEINQHTKPVKRS-----IFWVRSKSHRLRKSASLRDRYAEVVKKPAIS--MNT 379

  Fly   337 MRSDDDFNVRLGSGRSKEDGGDRQTLAQEARLSYSFSQPALLDDLLLATQMNQTQNASQNYFQRL 401
            .:.|:.|               .|...|...:.:....|       :::|:.:.|:..|      
  Fly   380 RQQDEMF---------------VQNFLQPIEMGHELLVP-------VSSQLKEPQSTEQ------ 416

  Fly   402 VRRMTRFF---------VTTRWDDTIKRLVGTIERLG-------------------GYTCKFGDD 438
            .:|.||.:         ||....:..|:|....:.:|                   .|..:.|..
  Fly   417 AKRPTRRYMFCGSLKKKVTPMETEPEKQLANGGQSIGSAKINPWNVEVAEDCPLFKNYDAETGSC 481

  Fly   439 GVVTVSTVDRNKL-RLVFKAHII----EMDGKILVDCRLS 473
            .::..:|.|.::| .|.|:|..|    .:..::|::.|.|
  Fly   482 VMLPTNTEDLSQLGALEFEARQILAELGLTSEMLINARQS 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grpNP_477011.1 STKc_Chk1 20..279 CDD:270971 79/258 (31%)
S_TKc 22..278 CDD:214567 79/257 (31%)
CG4629NP_608564.3 STKc_NIM1 63..321 CDD:270977 79/258 (31%)
S_TKc 66..321 CDD:214567 79/258 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24343
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.