DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment grp and txt-2

DIOPT Version :9

Sequence 1:NP_477011.1 Gene:grp / 34993 FlyBaseID:FBgn0261278 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_872128.2 Gene:txt-2 / 178551 WormBaseID:WBGene00019817 Length:328 Species:Caenorhabditis elegans


Alignment Length:324 Identity:119/324 - (36%)
Similarity:171/324 - (52%) Gaps:40/324 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 EFVEGWTLAQTLGEGAYGEVKLLINRQT-GEAVAMKMVDL-KKHPDAANSVRKEVCIQKML-QDK 78
            ||:|      .||||::.||.|:....| .:..|||.:.: .|......|:::|..|||.| :.:
 Worm    23 EFIE------NLGEGSFAEVVLVAKVGTPNKMFAMKEISIVGKDECFMESIKRECSIQKRLSKSR 81

  Fly    79 HI--LRFFGKRSQGSVEYIFLEYAAGGELFDRIEPDVGMPQHEAQRYFTQLLSGLNYLHQRGIAH 141
            |:  :..|..|:......:.|.||.||:||::|....|:...||.|||.||:.||.::|:.|:.|
 Worm    82 HLNMIHLFEIRTNPENYQLILSYADGGDLFEKINQHGGLGSDEAHRYFKQLIDGLRFIHEEGVTH 146

  Fly   142 RDLKPENLLLDEHDNVKISDFGMATMFRCKGKERLLDKRCGTLPYVAPEVLQKAYHAQPA-DLWS 205
            ||:|||||||.:...:||:|||.|||.|..|.|::|:..||:.||:|||||....:..|| |:||
 Worm   147 RDIKPENLLLTKSGILKIADFGFATMHRFNGAEQMLNAYCGSPPYIAPEVLTGIDYRGPAVDIWS 211

  Fly   206 CGVILVTMLAGELPWDQ-------PSTNCTEFTNWRDNDHWQLQTPWSKLDTLAISLLRKLLATS 263
            .||:|:.|:||.:||:|       .|..|:...|.|       :..||::....||||||:|..:
 Worm   212 AGVVLIAMIAGAVPWEQADHFDIFQSRYCSFRRNGR-------KGAWSRMSQQVISLLRKILLQA 269

  Fly   264 PGTRLTLEKTLDHKWCNMQFADNERSYDLVDSAAALEICSPKAKRQRLQSSA----HLSNGLDD 323
            . .|.|:....:..|    |...|.    || |...|..|....||..|:|:    :..|.|.|
 Worm   270 E-LRATISMIEEDPW----FIYGEE----VD-AENKENGSQAQYRQESQTSSKPILNFENLLKD 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grpNP_477011.1 STKc_Chk1 20..279 CDD:270971 102/271 (38%)
S_TKc 22..278 CDD:214567 101/268 (38%)
txt-2NP_872128.2 PKc_like 22..284 CDD:389743 105/278 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D343319at33208
OrthoFinder 1 1.000 - - FOG0001125
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_104812
Panther 1 1.100 - - O PTHR24343
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R198
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.850

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