DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment grp and chek1

DIOPT Version :9

Sequence 1:NP_477011.1 Gene:grp / 34993 FlyBaseID:FBgn0261278 Length:512 Species:Drosophila melanogaster
Sequence 2:XP_002937561.2 Gene:chek1 / 100038224 XenbaseID:XB-GENE-491846 Length:474 Species:Xenopus tropicalis


Alignment Length:496 Identity:222/496 - (44%)
Similarity:315/496 - (63%) Gaps:53/496 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FVEGWTLAQTLGEGAYGEVKLLINRQTGEAVAMKMVDLKKHPDAANSVRKEVCIQKMLQDKHILR 82
            |||.|.|.|||||||||||:|.:||:|.||||:|:||:.:..|...:::||:||.:||...:|:|
 Frog     5 FVEDWDLVQTLGEGAYGEVQLAVNRKTEEAVAVKIVDMTRAADCPENIKKEICINRMLNHTNIVR 69

  Fly    83 FFGKRSQGSVEYIFLEYAAGGELFDRIEPDVGMPQHEAQRYFTQLLSGLNYLHQRGIAHRDLKPE 147
            |:|.|.:|:::|:||||..|||||||||||||||:.:||::|.||::|:.|||..||.|||:|||
 Frog    70 FYGHRREGNIQYLFLEYCRGGELFDRIEPDVGMPEQDAQKFFQQLIAGVEYLHSIGITHRDIKPE 134

  Fly   148 NLLLDEHDNVKISDFGMATMFRCKGKERLLDKRCGTLPYVAPEVLQ-KAYHAQPADLWSCGVILV 211
            |||||:.|::||||||:||:||...|||||:|.||||||||||::: :|::|:|.|:||||::|.
 Frog   135 NLLLDDRDHLKISDFGLATVFRHNAKERLLNKMCGTLPYVAPELIKSRAFNAEPVDVWSCGIVLT 199

  Fly   212 TMLAGELPWDQPSTNCTEFTNWRDNDHWQLQTPWSKLDTLAISLLRKLLATSPGTRLTLEKTLDH 276
            .|||||||||||:..|.|:.:|::.:|:  .|||.|:....::||.|:|..:|.:|:|:......
 Frog   200 AMLAGELPWDQPTEACQEYCDWKEKNHY--LTPWKKIGATPLALLCKMLTENPQSRITIPDIKKD 262

  Fly   277 KWCNMQFADNERSYDLVDSAAALEICSPKAKRQRLQSSAHLSNGLDDSISRNYCSQPMPTMRSDD 341
            :|..                   |:.....||.|.     .|.|..|  |...|.|    :|||.
 Frog   263 RWFT-------------------ELIKKGIKRSRA-----FSGGTSD--SSGLCKQ----IRSDM 297

  Fly   342 DFNV-----------------RLGSGRSKEDGGDRQTLAQEARLSYSFSQPALLDDLLLATQMNQ 389
            :.::                 |........:|.....|.|...:  ||||||..:::||::|:..
 Frog   298 EISIISHSEEKNAYSSTQPEPRTALATWDSNGSHIDNLVQGKGI--SFSQPACPENMLLSSQLIG 360

  Fly   390 TQNASQNYFQRLVRRMTRFFVTTRWDDTIKRLVGTIERLGGYTCKFGDDGVVTVSTVDRNKLRLV 454
            |..:|||.:||||:||||||.....:.:...|:.|.|:: ||..|......||:||.||...:|:
 Frog   361 TPGSSQNVWQRLVKRMTRFFTKVDAESSYSNLMDTCEKM-GYVLKKSCANQVTLSTTDRRNNKLI 424

  Fly   455 FKAHIIEMDGKILVDCRLSKGCGLEFKRRFIKIKNALEDIV 495
            ||.:::||:.:||:|.|||||.||||||.|:|||..::.||
 Frog   425 FKVNLVEMEDRILLDFRLSKGDGLEFKRHFLKIKKKMDAIV 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grpNP_477011.1 STKc_Chk1 20..279 CDD:270971 142/259 (55%)
S_TKc 22..278 CDD:214567 141/256 (55%)
chek1XP_002937561.2 STKc_Chk1 7..265 CDD:270971 142/259 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 320 1.000 Domainoid score I1239
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H975
Inparanoid 1 1.050 421 1.000 Inparanoid score I1752
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D343319at33208
OrthoFinder 1 1.000 - - FOG0001125
OrthoInspector 1 1.000 - - oto103095
Panther 1 1.100 - - LDO PTHR24343
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2646
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

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