DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trpgamma and Trpc3

DIOPT Version :10

Sequence 1:NP_001137830.2 Gene:Trpgamma / 34991 FlyBaseID:FBgn0032593 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_001401934.1 Gene:Trpc3 / 60395 RGDID:61973 Length:909 Species:Rattus norvegicus


Alignment Length:826 Identity:323/826 - (39%)
Similarity:480/826 - (58%) Gaps:100/826 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 LTLEEKKFLLAVERGDMAGTRRMLQKAQDTEYINVNCVDPLGRTALLMAIDNENLEMVELLINYN 142
            ||.||::||.|.|.|::...|:||::::.   :||||||.:|:.||.:|:.||:||:.|||:...
  Rat    97 LTAEEERFLDAAEYGNIPVVRKMLEESRT---LNVNCVDYMGQNALQLAVGNEHLEVTELLLKKE 158

  Fly   143 --VDTKDALLHSISEEFVEAVEVLLDHENVT-------------FHSEGNHSWESASEDTSTFTP 192
              ....||||.:||:.:|..||.:|.|....             ...:..::::   ||.:.|:|
  Rat   159 NLARIGDALLLAISKGYVRIVEAILGHPGFAASRRLTLSPCEQELRDDDFYAYD---EDGTRFSP 220

  Fly   193 DITPLILAAHRDNYEIIKILLDRGAVLPMPHDVRCGCDECVQSRQEDSLRHSRSRINAYRALASP 257
            ||||:|||||...||::.:||.:||.:..|||..|.|.:|.:.::.|:..|||||||||:.||||
  Rat   221 DITPIILAAHCHKYEVVHLLLLKGARIERPHDYFCRCADCAEKQRLDAFSHSRSRINAYKGLASP 285

  Fly   258 SLIALSSKDPILTAFELSWELRRLSFLEHEFKNEYQELRKQCQDFATALLDHTRTSHELEILLNH 322
            :.::|||:||:|||.|||.||.:|:.:|.||||:|::|..||:||...:||..|.|.|:|.:||.
  Rat   286 AYLSLSSEDPVLTALELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAILNG 350

  Fly   323 D--PTGPVYEHGERMHLNRLKLAIKLRQKKFVAHSNVQQLLASIWYEGLPGFRRKNMALQAVDII 385
            |  ...|:..||.:..|:|:|||||...||||||.|.||.|.:||||.|.|.|.:.:|::.:.::
  Rat   351 DLESVEPLERHGHKASLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTIAIKCLVVL 415

  Fly   386 RIGIMFPIFSLAYILAPYSSIGQTMRKPFIKFICHSASYFTFLFLLML-ASQRIETFIGGWFFAD 449
            .:.:..|..::.|.:||.|.:|:.:|.||:||:.|:||:..||.||:. ||.|.|    |.....
  Rat   416 VVALGLPFLAIGYWIAPCSRLGKILRSPFMKFVAHAASFIIFLGLLVFNASDRFE----GITTLP 476

  Fly   450 SSGMLNTMEELPTKRGAKPTFIEWLILAWVSGLIWSEVKQLWDVGLQEYLNDMWNVIDFVTNSLY 514
            :..:::..:::...:..:.|:.|.||:.||.|::|||.|:||..|.:||:..:|||:||...|::
  Rat   477 NITVIDYPKQIFRVKTTQFTWTEMLIMVWVLGMMWSECKELWLEGPREYIVQLWNVLDFGMLSIF 541

  Fly   515 VATVALRVVSFFQVQKEMIY-NSHATD-------LP---------RERWDAWDPMLISEGLFSAA 562
            :|....|.::|.|..|...| :||..:       ||         |::|...||.:|||||::.|
  Rat   542 IAAFTARFLAFLQATKAQQYVDSHVQESDLSEVTLPPEVQYFTYARDKWLPSDPQIISEGLYAIA 606

  Fly   563 NIFSSLKLVYIFSVNPHLGPLQVSLSRMVMDIMKFFFLYVLVLFAFGSGLNQLLWYYADLEKKRC 627
            .:.|..::.||...|...||||:||.|.|.||.||..|:::|..||..|:..|..||..      
  Rat   607 VVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAFMIGMFILYSYYLG------ 665

  Fly   628 PEVSPMSALLNMNGTNDPNACIVWRRFSNLFETTQTLFWAVFGLIDLDSFELDGIKIFTRFWGML 692
            .:|:|                    .|:.:.|:.:||||::|||.::.|..|.....|....|.:
  Rat   666 AKVNP--------------------AFTTVEESFKTLFWSIFGLSEVTSVVLKYDHKFIENIGYV 710

  Fly   693 MFGTYSVINIVVLLNLLIAMMNHSYQLISERADVEWKFARSKLWISYFEEGGTCPPPFNIIPTPK 757
            ::|.|:|..:|||||:||||:|.|||.|.:.:||||||||||||:|||::|.|.||||:::|:||
  Rat   711 LYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPPFSLVPSPK 775

  Fly   758 SIWYAIKWMRRVFCSGSSAARREHL-----------KTIRRKAQQASDRDF-------------K 798
            |..|.|  ||   .:..|..||..|           |:......|::.|.|             :
  Rat   776 SFVYFI--MR---ITNFSKCRRRRLQKDLELGMGNSKSRLNLFTQSNSRVFESHSFNSILNQPTR 835

  Fly   799 YQQIMRNLVRRYVTVEQRKAESQGVTEDDVNEIKQDISAFRCELVE 844
            |||||:.|::|||...|...|:..|.|.::.|||||||:.|.||:|
  Rat   836 YQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLE 881

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrpgammaNP_001137830.2 trp 77..841 CDD:273311 320/821 (39%)
ANK repeat 118..147 CDD:293786 11/30 (37%)
ANK repeat 175..217 CDD:293786 17/41 (41%)
TRP_CaM_bind1 865..>891 CDD:467881
Trpc3NP_001401934.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..92
trp 84..878 CDD:273311 320/821 (39%)
ANK 1. /evidence=ECO:0000255 99..128 10/31 (32%)
ANK repeat 134..165 CDD:293786 11/30 (37%)
ANK 2. /evidence=ECO:0000255 134..163 11/28 (39%)
ANK 3. /evidence=ECO:0000255 165..191 11/25 (44%)
ANK repeat 214..249 CDD:293786 18/34 (53%)
ANK 4. /evidence=ECO:0000255 220..249 16/28 (57%)
ANK 5. /evidence=ECO:0000255 622..651 14/28 (50%)
Blue background indicates that the domain is not in the aligned region.

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